RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RPL23AP62750 156 aaKnown RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 HIST1H3AP68431 136 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 NKX6-1P78426 367 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FOXO1Q12778 655 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TRA2AQ13595 282 aaKnown RBP eCLIP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM187Q14656 261 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR8G1Q15617 311 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 EIF2S3LQ2VIR3 472 aaKnown RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SNAI3Q3KNW1 292 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SP6Q3SY56 376 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SOHLH1Q5JUK2 328 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 RIPPLY2Q5TAB7 128 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 HIST2H3PS2Q5TEC6 136 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FAM27BQ5VT28 67 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM211Q6ICI0 200 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF774Q6NX45 483 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 DHRS11Q6UWP2 260 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 Q6ZSR3 168 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 Q6ZWC4 215 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FAM219AQ8IW50 185 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 WDFY1Q8IWB7 410 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 ZDHHC23Q8IYP9 409 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FBXL14Q8N1E6 418 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR2C3Q8N628 320 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SLC35G3Q8N808 338 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 WDSUB1Q8N9V3 476 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 BHLHE23Q8NDY6 225 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 DMBX1Q8NFW5 382 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR2G3Q8NGZ4 309 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR2AE1Q8NHA4 323 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR2V1Q8NHB1 315 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SCGB1C1Q8TD33 95 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SECTM1Q8WVN6 248 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 PIGCQ92535 297 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 HIST1H2BAQ96A08 127 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CPNE4Q96A23 557 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SGCZQ96LD1 299 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CLCC1Q96S66 551 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 NIPSNAP3BQ9BS92 247 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 BCL2L14Q9BZR8 327 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 PLK3Q9H4B4 646 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TUBA4BQ9H853 241 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 PLEKHF2Q9H8W4 249 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CRLF2Q9HC73 371 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF319Q9P2F9 582 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CACFD1Q9UGQ2 172 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 BOKQ9UMX3 212 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 AMDHD2Q9Y303 409 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FBXO7Q9Y3I1 522 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TIMM10BQ9Y5J6 103 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 PUS1Q9Y606 427 aaKnown RBP eCLIP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 MTORP42345 2549 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TDRD6O60522 2096 aaKnown RBP3.74□□□□□ -1.81
ATXN3-241ENST00000556374 CCDC187A0A096LP49 1063 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 hCG_38984A0A1B0GV85 526 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1B0GW64 132 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 A0A1W2PPH5 198 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 A1L4Q6 167 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 C7orf77A4D0Y5 90 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 RBFOX3A6NFN3 312 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 ANKRD30BLA7E2S9 258 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 RNF212BA8MTL3 300 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF587BE7ETH6 402 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 G3V3Y1 287 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 H0Y980 276 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 K7ENP7 123 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 AP4M1O00189 453 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 UBE2CO00762 179 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 GEMIN2O14893 280 aaKnown RBP3.74□□□□□ -1.81
ATXN3-241ENST00000556374 DEGS1O15121 323 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 KLK10O43240 276 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 SYNGR3O43761 229 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 EFNA2O43921 213 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 RAMP1O60894 148 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 TRAPPC6AO75865 159 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 F10P00742 488 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 SERPINE2P07093 398 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 FABP1P07148 127 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 OR13C7P0DN81 318 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 CCL3P10147 92 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 COX6A1P12074 109 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF32P17041 273 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 CRYGSP22914 178 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 OTX2P32243 289 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 AKR1C3P42330 323 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 SULT1A1P50225 295 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF134P52741 427 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 FOXL2P58012 376 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 UBE2KP61086 200 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 HBG1P69891 147 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 HBG2P69892 147 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 CTAG1AP78358 180 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 H3F3AP84243 136 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 IL24Q13007 206 aa3.74□□□□□ -1.81
ATXN3-241ENST00000556374 IL15RAQ13261 267 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms