RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 C1orf87Q8N0U7 546 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
VPS33B-205ENST00000556096 C14orf79Q96F83 325 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 PARP12Q9H0J9 701 aaKnown RBP12.25□□□□□ -0.45
VPS33B-205ENST00000556096 OR6C3Q9NZP0 311 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 OR5AC2Q9NZP5 309 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 PLCE1Q9P212 2302 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 LGALS8O00214 317 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 TNFSF12O43508 249 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 SSTR5P35346 364 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 NUP62P37198 522 aaPredicted RBP12.24□□□□□ -0.45
VPS33B-205ENST00000556096 ZCCHC24Q8N2G6 241 aaKnown RBP12.24□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF808Q8N4W9 903 aaPredicted RBP12.24□□□□□ -0.45
VPS33B-205ENST00000556096 DRAM1Q8N682 238 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF645Q8N7E2 425 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 OR1S1Q8NH92 325 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 AQP10Q96PS8 301 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 SPIN2AQ99865 258 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 SPIN2BQ9BPZ2 258 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 DYNLRB1Q9NP97 96 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 OR2S2Q9NQN1 319 aa12.24□□□□□ -0.45
VPS33B-205ENST00000556096 CISD1Q9NZ45 108 aaKnown RBP12.24□□□□□ -0.45
VPS33B-205ENST00000556096 TRAV38-1A0A0B4J264 116 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 CLEC18AA5D8T8 446 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 TMEM178BH3BS89 294 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 SIGLEC5O15389 551 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 SIAH2O43255 324 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 DEDDO75618 318 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 CLDN14O95500 239 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 PLAUP00749 431 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 CGB3P0DN86 165 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 CGB7P0DN87 165 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 VDAC1P21796 283 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 LOXP28300 417 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-205ENST00000556096 S100A10P60903 97 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 UBA52P62987 128 aaKnown RBP12.23□□□□□ -0.45
VPS33B-205ENST00000556096 SMCO1Q147U7 214 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 TGIF2LYQ8IUE0 185 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 CLEC18CQ8NCF0 446 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 TMEM204Q9BSN7 226 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 DCTN5Q9BTE1 182 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 DYSFO75923 2080 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 RNF212BA8MTL3 300 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 C19orf84I3L1E1 186 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 F2RL2O00254 374 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 MBPP02686 304 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-205ENST00000556096 GYPAP02724 150 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 EDDM3BP56851 147 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 GNMTQ14749 295 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 SWI5Q1ZZU3 235 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF672Q499Z4 452 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-205ENST00000556096 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 DEFB108BQ8NET1 73 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 OR4D5Q8NGN0 318 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 RRNAD1Q96FB5 475 aaKnown RBP12.23□□□□□ -0.45
VPS33B-205ENST00000556096 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 PLEKHF2Q9H8W4 249 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 DCAF16Q9NXF7 216 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 JPT1Q9UK76 154 aa12.23□□□□□ -0.45
VPS33B-205ENST00000556096 SPTBN1Q01082 2364 aaKnown RBP12.22□□□□□ -0.45
VPS33B-205ENST00000556096 DEFB108AA8MXU0 73 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 CLDN1O95832 211 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 SERPINE2P07093 398 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 PPP1CCP36873 323 aaKnown RBP12.22□□□□□ -0.45
VPS33B-205ENST00000556096 NMSQ5H8A3 153 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 KIAA2026Q5HYC2 2103 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 OR52M1Q8NGK5 317 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 OR51H1Q8NH63 302 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 RFESDQ8TAC1 157 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 ABHD14BQ96IU4 210 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 CCL13Q99616 98 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 GSX2Q9BZM3 304 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
VPS33B-205ENST00000556096 LIN7CQ9NUP9 197 aaKnown RBP12.22□□□□□ -0.45
VPS33B-205ENST00000556096 ANKHD1Q8IWZ3 2542 aaKnown RBP12.21□□□□□ -0.45
VPS33B-205ENST00000556096 PPIAL4EA0A075B759 164 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 NKX6-3A6NJ46 265 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 PPIAL4DF5H284 164 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 K7EPK0 472 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 YPEL1O60688 119 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 PPIAL4FP0DN26 164 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 SLC25A6P12236 298 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 SELLP14151 372 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 EIF4EBP1Q13541 118 aaPredicted RBP12.21□□□□□ -0.45
VPS33B-205ENST00000556096 FAM71E2Q8N5Q1 922 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 EDARADDQ8WWZ3 215 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 ST8SIA2Q92186 375 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 CORO2AQ92828 525 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 YPEL2Q96QA6 119 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 OR2D2Q9H210 308 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 PLEKHA2Q9HB19 425 aa12.21□□□□□ -0.45
VPS33B-205ENST00000556096 LSM5Q9Y4Y9 91 aaKnown RBP12.21□□□□□ -0.45
VPS33B-205ENST00000556096 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms