RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 HSD17B11Q8NBQ5 300 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 LYPD6BQ8NI32 183 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 HPSE2Q8WWQ2 592 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 FOXRED1Q96CU9 486 aaPredicted RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF799Q96GE5 643 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 PIMREGQ9BSJ6 248 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 SPACA1Q9HBV2 294 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 GCM1Q9NP62 436 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 NOX4Q9NPH5 578 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 PARP11Q9NR21 331 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 OR14J1Q9UGF5 321 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 GAB2Q9UQC2 676 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 NOP16Q9Y3C1 178 aaKnown RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 ETV7Q9Y603 341 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 V9GY05 133 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 NOTCH2Q04721 2471 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 NIPBLQ6KC79 2804 aaeCLIP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 DYSFO75923 2080 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 IGHV1-69-2A0A0G2JMI3 117 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 A0A0U1RQV5 110 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 LOC100289279A0A1B0GTE1 492 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 SMCO3A2RU48 225 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 SLC22A31A6NKX4 558 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 WIPF1O43516 503 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 CRLF1O75462 422 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 MRPL3P09001 348 aaKnown RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 GZMBP10144 247 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 PSMB6P28072 239 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 SULT1A2P50226 295 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 EIF2B1Q14232 305 aaKnown RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 UBE2V2Q15819 145 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 AKR1C8PQ5T2L2 129 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 GGNBP1Q5YKI7 109 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM42Q69YG0 159 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 AWAT2Q6E213 333 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 EIF5AL1Q6IS14 154 aaKnown RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 FDX2Q6P4F2 183 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 PRIMA1Q86XR5 153 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 OR2C3Q8N628 320 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 MAPK1IP1LQ8NDC0 245 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 OR13C8Q8NGS7 320 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 TERB2Q8NHR7 220 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 DCUN1D4Q92564 292 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 ZMYND19Q96E35 227 aaPredicted RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 RRNAD1Q96FB5 475 aaKnown RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 RNF126Q9BV68 326 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 SCRT1Q9BWW7 348 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 ACTR3CQ9C0K3 210 aaPredicted RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 OR51B6Q9H340 312 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 FAM212BQ9NTI7 297 aaPredicted RBP3.27□□□□□ -1.89
LINC00648-202ENST00000555985 STEAP1Q9UHE8 339 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 CCDC168Q8NDH2 2452 aa3.27□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM210A6NLX4 147 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM178BH3BS89 294 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 IFNL4K9M1U5 179 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ITGB1BP1O14713 200 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 CST4P01036 141 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 HLA-AP01891 365 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR8U9P0C7N5 309 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF823P16415 610 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 SELEP16581 610 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZBTB25P24278 435 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 CFHR2P36980 270 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 RBMXP38159 391 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 GUCA1AP43080 201 aaPredicted RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 CX3CR1P49238 355 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF121P58317 390 aaPredicted RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 RBX1P62877 108 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ACTC1P68032 377 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ACTA1P68133 377 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 SSBP1Q04837 148 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 EGR3Q06889 387 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF674Q2M3X9 581 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 MOGAT2Q3SYC2 334 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM155Q4W5P6 130 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 TP53I3Q53FA7 332 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF529Q6P280 563 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 RPL22L1Q6P5R6 122 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 CRIP3Q6Q6R5 217 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF841Q6ZN19 808 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 FOXRED2Q8IWF2 684 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 ZSCAN4Q8NAM6 433 aaPredicted RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR5L1Q8NGL2 311 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR13D1Q8NGV5 346 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR2AJ1Q8NGZ0 328 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR8S1Q8NH09 359 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 CLDND2Q8NHS1 167 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 RNASEH2CQ8TDP1 164 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 DVL3Q92997 716 aaPredicted RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 SPTSSAQ969W0 71 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 MSI2Q96DH6 328 aaKnown RBP3.26□□□□□ -1.89
LINC00648-202ENST00000555985 PELI1Q96FA3 418 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 OR8B4Q96RC9 309 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 HIST1H2BLQ99880 126 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 MSL2Q9HCI7 577 aa3.26□□□□□ -1.89
LINC00648-202ENST00000555985 MRM2Q9UI43 246 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms