RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SMIM21Q3B7S5 101 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 PRAMEF6Q5VXH4 476 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 Q6P435 159 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 GSG1LQ6UXU4 331 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 Q6ZR03 302 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 KCTD9Q7L273 389 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 C11orf53Q8IXP5 236 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 SLC38A6Q8IZM9 456 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF565Q8N9K5 539 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ASCC1Q8N9N2 400 aaKnown RBP5.71□□□□□ -1.5
SLIRP-204ENST00000555890 CCDC71LQ8N9Z2 235 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 NUP37Q8NFH4 326 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 OR5M8Q8NGP6 311 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 OR10Z1Q8NGY1 313 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 ELMOD3Q96FG2 381 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 RTBDNQ9BSG5 229 aaPredicted RBP5.71□□□□□ -1.5
SLIRP-204ENST00000555890 PDCD10Q9BUL8 212 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 HES4Q9HCC6 221 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 DECR2Q9NUI1 292 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 C1orf123Q9NWV4 160 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 KCNIP1Q9NZI2 227 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 COQ3Q9NZJ6 369 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 PIPOXQ9P0Z9 390 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 TAAR3PQ9P1P4 343 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 IL36RNQ9UBH0 155 aa5.71□□□□□ -1.5
SLIRP-204ENST00000555890 PRR14LQ5THK1 2151 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 IGLV3-9A0A075B6K5 115 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 IGHV3-64DA0A0J9YX35 117 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 C5orf51A6NDU8 294 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 IFNL4K9M1U5 179 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 SLC33A1O00400 549 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 HSPB6O14558 160 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 PTBP3O95758 552 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 OR2H2O95918 312 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 NFYAP23511 347 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 LMO1P25800 156 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 S100GP29377 79 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 CHRNB4P30926 498 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 KCNJ3P48549 501 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF81P51508 661 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 H2BFSP57053 126 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 FXYD4P59646 89 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 SRSF4Q08170 494 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 BAMBIQ13145 260 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 DAZAP2Q15038 168 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 SLC9A3R2Q15599 337 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 C2orf68Q2NKX9 166 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF660Q6AZW8 331 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF880Q6PDB4 577 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 WDR82Q6UXN9 313 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ACP7Q6ZNF0 438 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ZNF826PQ6ZT77 177 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 FAM185AQ8N0U4 392 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 C9orf62Q8N4C0 152 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 OR5T2Q8NGG2 359 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 OR4A4PQ8NGN8 299 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 LILRB1Q8NHL6 650 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 GRPEL2Q8TAA5 225 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 MRPL30Q8TCC3 161 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 LRRC29Q8WV35 223 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM171Q8WVE6 324 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 TOMM40LQ969M1 308 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 MRPL24Q96A35 216 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM230Q96A57 120 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 MOB3AQ96BX8 217 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 NEIL1Q96FI4 390 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 CYYR1Q96J86 154 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 DIRC2Q96SL1 478 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ESRP2Q9H6T0 727 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 METTL8Q9H825 291 aaKnown RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 SEBOXQ9HB31 216 aaPredicted RBP5.7□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM165Q9HC07 324 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 RAB18Q9NP72 206 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 UFSP2Q9NUQ7 469 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 LPAR3Q9UBY5 353 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 OR14J1Q9UGF5 321 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 NDRG3Q9UGV2 375 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 OPN4Q9UHM6 478 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 TRAPPC2LQ9UL33 140 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 SLC45A2Q9UMX9 530 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 CMYA5Q8N3K9 4069 aa5.7□□□□□ -1.5
SLIRP-204ENST00000555890 ABCA1O95477 2261 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 PIGBOS1A0A0B4J2F0 54 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 C13orf42A0A1B0GVH6 325 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 TMEM30CPA0ZSE6 113 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 NKX2-6A6NCS4 301 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 DPRXA6NFQ7 191 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 CRYM-AS1A6NIL9 109 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 ZSCAN5BA6NJL1 495 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 DBX1A6NMT0 343 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 HMSDA8MTL9 139 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 FAM25EA8MYX2 175 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 B5MCH6 92 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 L7N2F9 121 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 ABCD4O14678 606 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 BET1O15155 118 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 SPRY3O43610 288 aa5.69□□□□□ -1.5
SLIRP-204ENST00000555890 PPYP01298 95 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms