RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TGFAP01135 160 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 RLN1P04808 185 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-220ENST00000555634 HNF1AP20823 631 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 AADACP22760 399 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 PRTN3P24158 256 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 ZFP36P26651 326 aaKnown RBP9.2□□□□□ -0.94
SHMT2-220ENST00000555634 LGALS4P56470 323 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 CATR1Q13166 79 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 CBX3Q13185 183 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 HERPUD1Q15011 391 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 LY6G6FQ5SQ64 297 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 Q6ZPA2 131 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 ZDHHC22Q8N966 263 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 OR4D10Q8NGI6 311 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 SECTM1Q8WVN6 248 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 DACT3Q96B18 629 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF486Q96H40 463 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-220ENST00000555634 C1orf159Q96HA4 380 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 S1PR3Q99500 378 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 SLC5A7Q9GZV3 580 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 C11orf54Q9H0W9 315 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-220ENST00000555634 OR2D2Q9H210 308 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 TBC1D24Q9ULP9 559 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 NUBP2Q9Y5Y2 271 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 AUP1Q9Y679 476 aa9.2□□□□□ -0.94
SHMT2-220ENST00000555634 A0A087X0M5 115 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 IGHV2-26A0A0B4J1V2 119 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 A0A1B0GX30 115 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 RAB29O14966 203 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 TXNL1O43396 289 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 FCN3O75636 299 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 NDUFB6O95139 128 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 CGB3P0DN86 165 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 CGB7P0DN87 165 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 IGHV4-31P0DP07 118 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 ANXA3P12429 323 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 COX7A1P24310 79 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 CD34P28906 385 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 SLC6A1P30531 599 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 DLX6P56179 175 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 SCGB2A2Q13296 93 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 GNMTQ14749 295 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 MORN2Q502X0 79 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 GPR157Q5UAW9 335 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 FAHD2BQ6P2I3 314 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-220ENST00000555634 DHRS11Q6UWP2 260 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 TMED4Q7Z7H5 227 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF645Q8N7E2 425 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-220ENST00000555634 FAHD2AQ96GK7 314 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 CYYR1Q96J86 154 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 C20orf85Q9H1P6 137 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 SIRT7Q9NRC8 400 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 NUDT15Q9NV35 164 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 PSG11Q9UQ72 335 aa9.19□□□□□ -0.94
SHMT2-220ENST00000555634 A0A096LNT2 108 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 IGKV1-6A0A0C4DH72 117 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 GPR31O00270 319 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 PLA2G10O15496 165 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 TUSC2O75896 110 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 DHFRP00374 187 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 ARG1P05089 322 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 OR8U9P0C7N5 309 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 CCR6P51684 374 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 UCP3P55916 312 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 LOXL3P58215 753 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 MSMO1Q15800 293 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 CCDC144NLQ6NUI1 221 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 PNKDQ8N490 385 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 ZBTB34Q8NCN2 500 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 MAPK1IP1LQ8NDC0 245 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 BEND2Q8NDZ0 799 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 OR13C8Q8NGS7 320 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 MSI2Q96DH6 328 aaKnown RBP9.18□□□□□ -0.94
SHMT2-220ENST00000555634 AKR1E2Q96JD6 320 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 TMPRSS13Q9BYE2 586 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 TOLLIPQ9H0E2 274 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 FXYD6Q9H0Q3 95 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 SIRPDQ9H106 197 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 MMP28Q9H239 520 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 UNKLQ9H9P5 680 aaKnown RBP9.18□□□□□ -0.94
SHMT2-220ENST00000555634 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-220ENST00000555634 LIN7CQ9NUP9 197 aaKnown RBP9.18□□□□□ -0.94
SHMT2-220ENST00000555634 WNK2Q9Y3S1 2297 aa9.18□□□□□ -0.94
SHMT2-220ENST00000555634 PDZD2O15018 2839 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-220ENST00000555634 J3QR06 171 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 TCRBP04435 133 aa9.17□□□□□ -0.94
SHMT2-220ENST00000555634 EPHA1P21709 976 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms