RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TMEM30BQ3MIR4 351 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 C11orf88Q6PI97 169 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 Q8N6K4 173 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 C5orf56Q8N8D9 126 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 GALMQ96C23 342 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 EAF1Q96JC9 268 aaPredicted RBP10.86□□□□□ -0.67
SNX6-203ENST00000555416 CENPOQ9BU64 300 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 ABHD14AQ9BUJ0 271 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 IFI27L2Q9H2X8 130 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 Q9N2K0 584 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 OR1A1Q9P1Q5 309 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 ELF5Q9UKW6 265 aaPredicted RBP10.86□□□□□ -0.67
SNX6-203ENST00000555416 SSR3Q9UNL2 185 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 LOC100506127A0A0U1RQW1 187 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 NOTOA8MTQ0 251 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 M0QZ24 198 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 YPEL1O60688 119 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
SNX6-203ENST00000555416 CD36P16671 472 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 SDC2P34741 201 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 TGFBR1P36897 503 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 C9orf152Q5JTZ5 239 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 IZUMO1Q8IYV9 350 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 OR10R2Q8NGX6 335 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 RAB3CQ96E17 227 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 AKR1E2Q96JD6 320 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 YPEL2Q96QA6 119 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 CITED2Q99967 270 aaPredicted RBP10.85□□□□□ -0.67
SNX6-203ENST00000555416 CMSS1Q9BQ75 279 aaKnown RBP10.85□□□□□ -0.67
SNX6-203ENST00000555416 MRPL20Q9BYC9 149 aaKnown RBP10.85□□□□□ -0.67
SNX6-203ENST00000555416 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 C12orf4Q9NQ89 552 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
SNX6-203ENST00000555416 LINC01548A6NM66 108 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 MFNGO00587 321 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 ST8SIA5O15466 376 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 LANCL1O43813 399 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 FBXO24O75426 580 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 GNB3P16520 340 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 RAB6AP20340 208 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 IL3RAP26951 378 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 HLA-DRB3P79483 266 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 MXD1Q05195 221 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 ARSJQ5FYB0 599 aaPredicted RBP10.84□□□□□ -0.67
SNX6-203ENST00000555416 STEAP3Q658P3 488 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 MOB1BQ7L9L4 216 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 TGIF2LXQ8IUE1 241 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 TSPAN14Q8NG11 270 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 FAM110DQ8TAY7 271 aaPredicted RBP10.84□□□□□ -0.67
SNX6-203ENST00000555416 MAFIPQ8WZ33 124 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 RITA1Q96K30 269 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 ZNF251Q9BRH9 671 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
SNX6-203ENST00000555416 ABRACLQ9P1F3 81 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 DAPK2Q9UIK4 370 aa10.84□□□□□ -0.67
SNX6-203ENST00000555416 A0A075B6Q4 140 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 SAA2-SAA4A0A096LPE2 208 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 CD3GP09693 182 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 SAA2P0DJI9 122 aaPredicted RBP10.83□□□□□ -0.68
SNX6-203ENST00000555416 HIST1H1DP16402 221 aaKnown RBP10.83□□□□□ -0.68
SNX6-203ENST00000555416 CD1BP29016 333 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 F2RL1P55085 397 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 LSAMPQ13449 338 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 NSUN5P1Q3KNT7 163 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 RPL39P5Q59GN2 51 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 LY6G6FQ5SQ64 297 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 SFXN4Q6P4A7 337 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 TPRA1Q86W33 373 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 DTX3Q8N9I9 347 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 Q8N9W7 124 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 OR5AU1Q8NGC0 362 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 YIPF6Q96EC8 236 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 KCTD7Q96MP8 289 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 NOL4LQ96MY1 436 aaPredicted RBP10.83□□□□□ -0.68
SNX6-203ENST00000555416 NABP2Q9BQ15 211 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 SLC23A1Q9UHI7 598 aa10.83□□□□□ -0.68
SNX6-203ENST00000555416 ZNF230Q9UIE0 474 aaPredicted RBP10.83□□□□□ -0.68
SNX6-203ENST00000555416 NOTCH1P46531 2555 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 TRIM64CA6NLI5 447 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 M0QZK8 103 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 PROP1O75360 226 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 FCGR3AP08637 254 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 CSF1P09603 554 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 C2orf68Q2NKX9 166 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 OR5H6Q8NGV6 325 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 OR2T10Q8NGZ9 312 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 LGALS14Q8TCE9 139 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 ABHD14BQ96IU4 210 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 AGMATQ9BSE5 352 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 ATG5Q9H1Y0 275 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 MMP27Q9H306 513 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
SNX6-203ENST00000555416 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
SNX6-203ENST00000555416 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
SNX6-203ENST00000555416 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
SNX6-203ENST00000555416 TRDCB7Z8K6 153 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms