RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 IGKV1D-33P01593 117 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 IGKV1-33P01594 117 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SRP54-206ENST00000555317 HIST1H1DP16402 221 aaKnown RBP9.69□□□□□ -0.86
SRP54-206ENST00000555317 GNB3P16520 340 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 TMEM50BP56557 158 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 DIAPH2-AS1Q14236 149 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 HNF4GQ14541 408 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 KIR2DS1Q14954 304 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 CT45A1Q5HYN5 189 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 C9orf152Q5JTZ5 239 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 ZNF880Q6PDB4 577 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 CROCCP3Q8IVE0 287 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 ZNF439Q8NDP4 499 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 RTN4IP1Q8WWV3 396 aaPredicted RBP9.69□□□□□ -0.86
SRP54-206ENST00000555317 YPEL2Q96QA6 119 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 CITED1Q99966 193 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 RNF167Q9H6Y7 350 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 ZNF702PQ9H963 129 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 Q9N2K0 584 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 TET2Q6N021 2002 aaPredicted RBP9.68□□□□□ -0.86
SRP54-206ENST00000555317 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 IGHV3-72A0A0B4J1Y9 119 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 TRDCB7Z8K6 153 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 CLEC2LP0C7M8 214 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 ZBTB25P24278 435 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 ZNF134P52741 427 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 SCAND1P57086 179 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 LSM3P62310 102 aaKnown RBP9.68□□□□□ -0.86
SRP54-206ENST00000555317 SRSF4Q08170 494 aaKnown RBP9.68□□□□□ -0.86
SRP54-206ENST00000555317 HABP2Q14520 560 aaPredicted RBP9.68□□□□□ -0.86
SRP54-206ENST00000555317 HERPUD1Q15011 391 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 MOGAT2Q3SYC2 334 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 ABCA11PQ4W5N1 156 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 LY6G6FQ5SQ64 297 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 OR2T10Q8NGZ9 312 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 EDARADDQ8WWZ3 215 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 CFHR4Q92496 578 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 YIPF6Q96EC8 236 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 S1PR3Q99500 378 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 RHBDL2Q9NX52 303 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 ETV7Q9Y603 341 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 VWFP04275 2813 aa9.68□□□□□ -0.86
SRP54-206ENST00000555317 NCBP2LA6PVI3 153 aaKnown RBP9.67□□□□□ -0.86
SRP54-206ENST00000555317 RAB27BO00194 218 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 MFNGO00587 321 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 LANCL1O43813 399 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 TMEM127O75204 238 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 FCGR3AP08637 254 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 CD1BP29016 333 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 CEACAM6P40199 344 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 ZNF137PP52743 207 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 BLCAPP62952 87 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 C5orf24Q7Z6I8 188 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 IZUMO1Q8IYV9 350 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 Q8N2B8 174 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 OR4A4PQ8NGN8 299 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 PIPOXQ9P0Z9 390 aa9.67□□□□□ -0.86
SRP54-206ENST00000555317 SAA2-SAA4A0A096LPE2 208 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 FAM90A9PA6NNJ1 464 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 RAB29O14966 203 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 FABP7O15540 132 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 FGF16O43320 207 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 FBXO24O75426 580 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 MOSP00540 346 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 SCTP09683 121 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 SAA2P0DJI9 122 aaPredicted RBP9.66□□□□□ -0.86
SRP54-206ENST00000555317 SERPINB10P48595 397 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 GNG2P59768 71 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 C2orf68Q2NKX9 166 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 CDNFQ49AH0 187 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 OR10J5Q8NHC4 309 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 ST6GALNAC6Q969X2 333 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 GINS4Q9BRT9 223 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 FUNDC2Q9BWH2 189 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 MRPS26Q9BYN8 205 aaKnown RBP9.66□□□□□ -0.86
SRP54-206ENST00000555317 GHITMQ9H3K2 345 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 OR1A1Q9P1Q5 309 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 KCNK7Q9Y2U2 307 aa9.66□□□□□ -0.86
SRP54-206ENST00000555317 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 BET1O15155 118 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 GSTP1P09211 210 aaKnown RBP9.65□□□□□ -0.86
SRP54-206ENST00000555317 DTYMKP23919 212 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 GPR12P47775 334 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 OR3A3P47888 321 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 KRTAP10-3P60369 221 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 PITPNAQ00169 270 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 LSAMPQ13449 338 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 TMEM95Q3KNT9 176 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 PRR31Q5SQ13 230 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 HACD4Q5VWC8 232 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 FAM71F2Q6NXP2 309 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 Q6ZPA2 131 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 OR13F1Q8NGS4 319 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 EAF1Q96JC9 268 aaPredicted RBP9.65□□□□□ -0.86
SRP54-206ENST00000555317 MRPL20Q9BYC9 149 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms