RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ZNF439Q8NDP4 499 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 C22orf15Q8WYQ4 148 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 ABHD14AQ9BUJ0 271 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 GHITMQ9H3K2 345 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 NECAP2Q9NVZ3 263 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 RDH8Q9NYR8 311 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 DPM3Q9P2X0 92 aa11.6□□□□□ -0.55
CHD8-208ENST00000555301 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 FCER2P06734 321 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 IL3RAP26951 378 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 OR3A3P47888 321 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 ZNF134P52741 427 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 DGCR2P98153 550 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 CDK10Q15131 360 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 PYDC2Q56P42 97 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 RBMS3Q6XE24 437 aaKnown RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 BCL6BQ8N143 479 aaPredicted RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 TAS2R8Q9NYW2 309 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 KLK11Q9UBX7 282 aa11.59□□□□□ -0.55
CHD8-208ENST00000555301 ZNF107Q9UII5 783 aaPredicted RBP11.59□□□□□ -0.55
CHD8-208ENST00000555301 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 A0A1W2PPE3 182 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 OOSP1A8MZH6 123 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 SLC31A2O15432 143 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 OR5H8P0DN80 308 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 HLA-DMAP28067 261 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 ZNF45Q02386 682 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 DEFB112Q30KQ8 113 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 LYSMD2Q8IV50 215 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 H1FOOQ8IZA3 346 aaPredicted RBP11.58□□□□□ -0.56
CHD8-208ENST00000555301 Q8N402 240 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 OR5H2Q8NGV7 314 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 SLC6A7Q99884 636 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 PRDM13Q9H4Q3 707 aa11.58□□□□□ -0.56
CHD8-208ENST00000555301 RBMX2Q9Y388 322 aaKnown RBP11.58□□□□□ -0.56
CHD8-208ENST00000555301 ZNF736B4DX44 427 aaPredicted RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 LY6LH3BQJ8 138 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 CSF1P09603 554 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 TBPP20226 339 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 ARHGDIBP52566 201 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 TAS2R19P59542 299 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 ZNF79Q15937 498 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 SSX2Q16385 188 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 LDLRAD2Q5SZI1 272 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 TPTE2P1Q5T6R2 138 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 OVCH2Q7RTZ1 564 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 LYG1Q8N1E2 194 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 TMEM229BQ8NBD8 167 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 ZNF418Q8TF45 676 aaPredicted RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 S100ZQ8WXG8 99 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 RPEQ96AT9 228 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 THAP7Q9BT49 309 aaPredicted RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 C11orf54Q9H0W9 315 aaPredicted RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 EHFQ9NZC4 300 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 PIPOXQ9P0Z9 390 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
CHD8-208ENST00000555301 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
CHD8-208ENST00000555301 DSCAML1Q8TD84 2053 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 RAB29O14966 203 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 ST8SIA5O15466 376 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 IFNA2P01563 188 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 PMP2P02689 132 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
CHD8-208ENST00000555301 HRH1P35367 487 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 ZNF137PP52743 207 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 DYRK1AQ13627 763 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 AANATQ16613 207 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 GDPD1Q8N9F7 314 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 GIMAP1Q8WWP7 306 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 TOMM40LQ969M1 308 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 ZNF48Q96MX3 618 aaPredicted RBP11.56□□□□□ -0.56
CHD8-208ENST00000555301 AGMATQ9BSE5 352 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 SRRQ9GZT4 340 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 PARP12Q9H0J9 701 aaKnown RBP11.56□□□□□ -0.56
CHD8-208ENST00000555301 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 HILPDAQ9Y5L2 63 aa11.56□□□□□ -0.56
CHD8-208ENST00000555301 MDFIC2A0A1B0GVS7 189 aa11.55□□□□□ -0.56
CHD8-208ENST00000555301 HSD17B6O14756 317 aa11.55□□□□□ -0.56
CHD8-208ENST00000555301 TXNL1O43396 289 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms