RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TRAPPC1Q9Y5R8 145 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF706Q9Y5V0 76 aaPredicted RBP2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 NCOR2Q9Y618 2525 aa2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 MYH9P35579 1960 aaKnown RBP2.76□□□□□ -1.97
CKS1BP1-201ENST00000555221 CLUHO75153 1309 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 RBBP6Q7Z6E9 1792 aaKnown RBP2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 ACACBO00763 2458 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 A0A1B0GXF2 115 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 LEUTXA8MZ59 168 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 FFAR1O14842 300 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 MYO1DO94832 1006 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 TPM3P06753 285 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 SOD3P08294 240 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 LGALS7P47929 136 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 UBE2KP61086 200 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 BAMBIQ13145 260 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 TRAM1Q15629 374 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 LDLRAD2Q5SZI1 272 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMEM215Q68D42 235 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 GLYATQ6IB77 296 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 ALKAL1Q6UXT8 129 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 AMN1Q8IY45 258 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 CDRT4Q8N9R6 151 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 OR8S1Q8NH09 359 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 TWIST2Q8WVJ9 160 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 FMC1Q96HJ9 113 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF75AQ96N20 296 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 SLC25A31Q9H0C2 315 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 XPNPEP1Q9NQW7 623 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 RBM12B-AS1Q9P1G2 102 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 MTCH2Q9Y6C9 303 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 MYH7BA7E2Y1 1941 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 C5orf42Q9H799 3197 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 DYSFO75923 2080 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 PARP14Q460N5 1801 aa2.75□□□□□ -1.97
CKS1BP1-201ENST00000555221 MCM3APO60318 1980 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 SHANK1Q9Y566 2161 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZFYVE26Q68DK2 2539 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 USP34Q70CQ2 3546 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 PGPA6NDG6 321 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 F8VP50 259 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 K7ERQ8 282 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 KLHL2O95198 593 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 FADS2O95864 444 aaKnown RBP2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 SLC2A1P11166 492 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF35P13682 527 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 PSMB9P28065 219 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 DEFB103AP81534 67 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 TFAMQ00059 246 aaKnown RBP2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 BAXQ07812 192 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 STX3Q13277 289 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 USF2Q15853 346 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMEM241Q24JQ0 296 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 PPP1R2P3Q6NXS1 205 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 ERICH5Q6P6B1 374 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 Q6ZT83 130 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 OR2Y1Q8NGV0 311 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 CASTOR1Q8WTX7 329 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 CATSPER2Q96P56 530 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 ACBD6Q9BR61 282 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 TM2D3Q9BRN9 247 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 SUCNR1Q9BXA5 334 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 POMKQ9H5K3 350 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 ABCA12Q86UK0 2595 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 THADAQ6YHU6 1953 aa2.74□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGKV3D-11A0A0A0MRZ8 115 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGHV3-21A0A0B4J1V1 117 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGHV3-43A0A0B4J1X8 118 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 MYBPHLA2RUH7 354 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 C4orf51C9J302 202 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 PIRO00625 290 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 CDIPTO14735 213 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 SHOX2O60902 331 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ENTPD6O75354 484 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 LDOC1O95751 146 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 MAGEA3P43357 314 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF83P51522 516 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZBTB6Q15916 424 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 BSXQ3C1V8 233 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 CEACAM21Q3KPI0 293 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 FAM173BQ6P4H8 233 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 CPNE9Q8IYJ1 553 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF664Q8N3J9 261 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 RPRMLQ8N4K4 120 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 OR2K2Q8NGT1 345 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 SPPL2BQ8TCT7 592 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 DUSP21Q9H596 190 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 DMAC2Q9NW81 257 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 MAT2BQ9NZL9 334 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 MRM2Q9UI43 246 aaKnown RBP2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 ITPR3Q14573 2671 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
CKS1BP1-201ENST00000555221 TRAV8-3A0A0A6YYJ7 113 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 GOLGA8QA0A0J9YX86 632 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms