RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FAM201AQ5SY85 155 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 PRSS54Q6PEW0 395 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 ZNF788Q6ZQV5 615 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 STPG2Q8N412 459 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 ZNF561Q8N587 486 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 CCDC71LQ8N9Z2 235 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DMBX1Q8NFW5 382 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 OR10V1Q8NGI7 309 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 IGF2RP11717 2491 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 FXYD6-FXYD2A0A087WZ82 144 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 PLAUP00749 431 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 HBZP02008 142 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 RNF224P0DH78 156 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 HTD2P86397 168 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
TDP1-210ENST00000554976 GNMTQ14749 295 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 NMSQ5H8A3 153 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 LYZL2Q7Z4W2 148 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 SLC35G3Q8N808 338 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 OR5D13Q8NGL4 314 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 IL22RA2Q969J5 263 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 SLC5A7Q9GZV3 580 aa7.4□□□□□ -1.22
TDP1-210ENST00000554976 FAM90A27PA6NNH2 459 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 L7N2F9 121 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 M0R233 179 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 F2RL2O00254 374 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 HSD17B6O14756 317 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 OR2F2O95006 317 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 IGKV1-39P01597 117 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 IGKV1D-39P04432 117 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 LOXL3P58215 753 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 BRWD1-AS2P59051 145 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 OR2F1Q13607 317 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 SNTB1Q13884 538 aaKnown RBP7.4□□□□□ -1.23
TDP1-210ENST00000554976 C17orf58Q2M2W7 97 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 ABCA11PQ4W5N1 156 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 SVIPQ8NHG7 77 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 LINC01560Q8TB33 94 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 SECTM1Q8WVN6 248 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 AKR1E2Q96JD6 320 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 AQP10Q96PS8 301 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 GPHA2Q96T91 129 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 AGMATQ9BSE5 352 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 PDCD10Q9BUL8 212 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 DNTTIP1Q9H147 329 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 CYTL1Q9NRR1 136 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 MIOXQ9UGB7 285 aa7.4□□□□□ -1.23
TDP1-210ENST00000554976 DUXBA0A1W2PPF3 345 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 MGST3O14880 152 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 DEDDO75618 318 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 RLN2P04090 185 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 SSTR5P35346 364 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 SPCS3P61009 180 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 RAB32Q13637 225 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 TRAT1Q6PIZ9 186 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 ZNF546Q86UE3 836 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 FAM216AQ8WUB2 273 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 DCTN5Q9BTE1 182 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 FAM234AQ9H0X4 552 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 CBY1Q9Y3M2 126 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 SPTBN4Q9H254 2564 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 PIEZO2Q9H5I5 2752 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 A0A0D9SG52 128 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 C13orf42A0A1B0GVH6 325 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 MSGN1A6NI15 193 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 KIAA1324LA8MWY0 1029 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 HOXB5P09067 269 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 P0C879 139 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 C4BPBP20851 252 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 F2RP25116 425 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 GPX4P36969 197 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 ZNF672Q499Z4 452 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 ZNF585BQ52M93 769 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 ACOT7LQ6ZUV0 252 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 TPRX1Q8N7U7 411 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 ZNRF1Q8ND25 227 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 OR52L2PQ8NGH6 319 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 CNTNAP3BQ96NU0 1288 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 VRK1Q99986 396 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 TCEAL7Q9BRU2 100 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 CNTNAP3Q9BZ76 1288 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 MFFQ9GZY8 342 aa7.39□□□□□ -1.23
TDP1-210ENST00000554976 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
TDP1-210ENST00000554976 PTPRZ1P23471 2315 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 TRBV23-1A0A0A0MS06 115 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ODAMA1E959 279 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 C5orf51A6NDU8 294 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 TMEM178BH3BS89 294 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 KCNAB3O43448 404 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 BCL2L11O43521 198 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 PITX3O75364 302 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 NMBP08949 121 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 MUC1P15941 1255 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 APOBEC3AP31941 199 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 CEACAM6P40199 344 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 UTF1Q5T230 341 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms