RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 NPBQ8NG41 125 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 OR52L2PQ8NGH6 319 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 OR6Q1Q8NGQ2 317 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 DLX4Q92988 240 aaPredicted RBP9.66□□□□□ -0.86
RDH11-207ENST00000554731 SLC29A1Q99808 456 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 SELENOIQ9C0D9 397 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 CST11Q9H112 138 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 BANF2Q9H503 90 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 PALMDQ9NP74 551 aa9.66□□□□□ -0.86
RDH11-207ENST00000554731 MBNL3Q9NUK0 354 aaKnown RBP9.66□□□□□ -0.86
RDH11-207ENST00000554731 IRGMA1A4Y4 181 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 WBP4O75554 376 aaKnown RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 CRTAPO75718 401 aaPredicted RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 MAS1P04201 325 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 MGMTP16455 207 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 SLURP1P55000 103 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 HTD2P86397 168 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 YIF1BQ5BJH7 314 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 ZNF833PQ6ZTB9 187 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 CDH26Q8IXH8 852 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 Q96M66 194 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 RDH12Q96NR8 316 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 TOLLIPQ9H0E2 274 aa9.65□□□□□ -0.86
RDH11-207ENST00000554731 ALX4Q9H161 411 aaPredicted RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 DIMT1Q9UNQ2 313 aaKnown RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 EXOSC1Q9Y3B2 195 aaKnown RBP9.65□□□□□ -0.86
RDH11-207ENST00000554731 SAA2-SAA4A0A096LPE2 208 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 TRBV5-7A0A0A0MS05 114 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 A0A1W2PN81 502 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 A0A1W2PPK0 400 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 YPEL1O60688 119 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 PDCD6O75340 191 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 NDUFA3O95167 84 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 LALBAP00709 142 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 LGALS1P09382 135 aaKnown RBP9.64□□□□□ -0.87
RDH11-207ENST00000554731 OR8U9P0C7N5 309 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 SAA2P0DJI9 122 aaPredicted RBP9.64□□□□□ -0.87
RDH11-207ENST00000554731 CHRNA7P36544 502 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 OR3A3P47888 321 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 RPS11P62280 158 aaKnown RBP eCLIP9.64□□□□□ -0.87
RDH11-207ENST00000554731 NDPQ00604 133 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 MED21Q13503 144 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 C19orf54Q5BKX5 351 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 LY6G6FQ5SQ64 297 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
RDH11-207ENST00000554731 SIGIRRQ6IA17 410 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 ACSM6Q6P461 480 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 C10orf67Q8IYJ2 551 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 TCTEX1D1Q8N7M0 179 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 ZNF555Q8NEP9 628 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 OR2AK2Q8NG84 335 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 MRPL30Q8TCC3 161 aaKnown RBP9.64□□□□□ -0.87
RDH11-207ENST00000554731 ARPC1AQ92747 370 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 GALMQ96C23 342 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 YPEL2Q96QA6 119 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 FAM53CQ9NYF3 392 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 LRRC42Q9Y546 428 aa9.64□□□□□ -0.87
RDH11-207ENST00000554731 RYR2Q92736 4967 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 DNAH7Q8WXX0 4024 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 A0A087WW49 117 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 TRIM64CA6NLI5 447 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 DYNC1I1O14576 645 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 SOX15O60248 233 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 CAPGP40121 348 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 CRIP2P52943 208 aaPredicted RBP9.63□□□□□ -0.87
RDH11-207ENST00000554731 CX3CL1P78423 397 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 PITPNAQ00169 270 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 TMEM267Q0VDI3 215 aaPredicted RBP9.63□□□□□ -0.87
RDH11-207ENST00000554731 PLGLAQ15195 96 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 FAM131AQ6UXB0 335 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 C5orf24Q7Z6I8 188 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 ZFP41Q8N8Y5 198 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 ABHD5Q8WTS1 349 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 CASTOR1Q8WTX7 329 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 FLYWCH2Q96CP2 140 aaKnown RBP9.63□□□□□ -0.87
RDH11-207ENST00000554731 PGLYRP3Q96LB9 341 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 OR4C12Q96R67 309 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 CITED4Q96RK1 184 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 FBXL15Q9H469 300 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 CLEC2DQ9UHP7 191 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 FBXO7Q9Y3I1 522 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 A3GALT2U3KPV4 340 aa9.63□□□□□ -0.87
RDH11-207ENST00000554731 LCE6AA0A183 80 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 RRHO14718 337 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 BAG2O95816 211 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 TAS2R43P59537 309 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 SRSF7Q16629 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
RDH11-207ENST00000554731 LRRC36Q1X8D7 754 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
RDH11-207ENST00000554731 PYHIN1Q6K0P9 492 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 FAM71F2Q6NXP2 309 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 NKAIN3Q8N8D7 197 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 FAM46BQ96A09 425 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 TMEM80Q96HE8 168 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 CYYR1Q96J86 154 aa9.62□□□□□ -0.87
RDH11-207ENST00000554731 NEDD4LQ96PU5 975 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms