RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 IGHV1-2P23083 117 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 TLE4Q04727 773 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR8G1Q15617 311 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF497Q6ZNH5 498 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF429Q86V71 674 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 GTF3AQ92664 365 aaKnown RBP13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 GP6Q9HCN6 339 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 UFSP2Q9NUQ7 469 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 WSB1Q9Y6I7 421 aa13.26□□□□□ -0.29
ARHGEF40-203ENST00000554514 TRBV6-6A0A0A6YYG2 114 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 LRP5LA4QPB2 252 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 MPV17P39210 176 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 ELLP55199 621 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 MRPL49Q13405 166 aaKnown RBP13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR8G2PQ6IF36 304 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR1L1Q8NH94 360 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 IFNA4P05014 189 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF816Q0VGE8 651 aaPredicted RBP13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 PSG7Q13046 419 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 DRAM1Q8N682 238 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 TPRX1Q8N7U7 411 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 RBM14Q96PK6 669 aaKnown RBP13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 POLDIP2Q9Y2S7 368 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 BOD1L1Q8NFC6 3051 aa13.25□□□□□ -0.29
ARHGEF40-203ENST00000554514 KIAA1324LA8MWY0 1029 aaPredicted RBP13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 M0R296 226 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 SH2D1BO14796 132 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 DFFBO76075 338 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 MMP9P14780 707 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 AGAP20933 346 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 PAX6P26367 422 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR3A1P47881 315 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 CCL11P51671 97 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 SOX8P57073 446 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF585BQ52M93 769 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 RAB40CQ96S21 281 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 DOCK11Q5JSL3 2073 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 C5orf52A6NGY3 159 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 PSPNO60542 156 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 DLK1P80370 383 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 AESQ08117 197 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 BTNL3Q6UXE8 466 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 EP300Q09472 2414 aaPredicted RBP13.24□□□□□ -0.29
ARHGEF40-203ENST00000554514 RAMP3O60896 148 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 HAND1O96004 215 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 KRASP01116 189 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 RAB2AP61019 212 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 RAB11AP62491 216 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 RNF212Q495C1 297 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR52L2PQ8NGH6 319 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 CLDND2Q8NHS1 167 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF665Q9H7R5 613 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 OR2D2Q9H210 308 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 LIN7CQ9NUP9 197 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 USF3Q68DE3 2245 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 CHD3Q12873 2000 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 HMGB3O15347 200 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 NKX2-8O15522 239 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 CLDN1O95832 211 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 PGA5P0DJD9 388 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 MDH2P40926 338 aaKnown RBP13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 LTC4SQ16873 150 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 NCMAPQ5T1S8 102 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 SSX7Q7RTT5 188 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 HAPLN4Q86UW8 402 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 PLPPR2Q96GM1 343 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 TUBA4BQ9H853 241 aa13.23□□□□□ -0.29
ARHGEF40-203ENST00000554514 IGHV3-43A0A0B4J1X8 118 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 A0A1B0GW64 132 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 BTBD17A6NE02 478 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 IGHV3-43DP0DP04 118 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 G6PCP35575 357 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 LINC00205P59089 165 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 TGFBR3Q03167 851 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 SPINK9Q5DT21 86 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 FGFRL1Q8N441 504 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 TMEM178AQ8NBL3 297 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 NIPSNAP3BQ9BS92 247 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 TMEM9BQ9NQ34 198 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 IL2RGP31785 369 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 FABP6P51161 128 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 ERVK11-1P61568 191 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 ZNF787Q6DD87 383 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 MOB1BQ7L9L4 216 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 RFESDQ8TAC1 157 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 KLF14Q8TD94 323 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 MRGPRDQ8TDS7 321 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 KCNIP1Q9NZI2 227 aa13.22□□□□□ -0.29
ARHGEF40-203ENST00000554514 LAMA5O15230 3695 aa13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 DEFB108AA8MXU0 73 aa13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 GABRA2P47869 451 aa13.21□□□□□ -0.29
ARHGEF40-203ENST00000554514 C21orf62-AS1Q17RA5 79 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms