RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ACTBP60709 375 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 RPS11P62280 158 aaKnown RBP eCLIP8.46□□□□□ -1.06
PNN-203ENST00000554117 CBX3Q13185 183 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 CT45A1Q5HYN5 189 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 C6orf141Q5SZD1 244 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 UTF1Q5T230 341 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 Q8N6K4 173 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 OR6M1Q8NGM8 313 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 CT45A3Q8NHU0 189 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 ST6GALNAC6Q969X2 333 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 KCTD7Q96MP8 289 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 P2RX4Q99571 388 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 PARP11Q9NR21 331 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 ZNF581Q9P0T4 197 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 ZNF580Q9UK33 172 aa8.46□□□□□ -1.06
PNN-203ENST00000554117 PRKDCP78527 4128 aaKnown RBP8.45□□□□□ -1.06
PNN-203ENST00000554117 OR5H14A6NHG9 310 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 SEC14L6B5MCN3 397 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 SLC31A2O15432 143 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 LY86O95711 162 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 IGHG4P01861 327 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 IGF1P05019 195 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 CDK1P06493 297 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 SRMP19623 302 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 ZBTB25P24278 435 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 BLVRBP30043 206 aaPredicted RBP8.45□□□□□ -1.06
PNN-203ENST00000554117 PPP1CCP36873 323 aaKnown RBP8.45□□□□□ -1.06
PNN-203ENST00000554117 INSL3P51460 131 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 PSMD7P51665 324 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 RPS27AP62979 156 aaKnown RBP8.45□□□□□ -1.06
PNN-203ENST00000554117 SPHARQ15513 63 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 LY6G6FQ5SQ64 297 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 FAM27D1Q5T7N8 215 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 PYHIN1Q6K0P9 492 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 LIN54Q6MZP7 749 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 ETV3LQ6ZN32 361 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 GAPTQ8N292 157 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 TCTEX1D1Q8N7M0 179 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 ZNF439Q8NDP4 499 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 TMEM104Q8NE00 496 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 OR11H1Q8NG94 326 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 OR52L2PQ8NGH6 319 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 MRPL30Q8TCC3 161 aaKnown RBP8.45□□□□□ -1.06
PNN-203ENST00000554117 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 B9D2Q9BPU9 175 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 VSIG4Q9Y279 399 aa8.45□□□□□ -1.06
PNN-203ENST00000554117 TRAV41A0A0B4J266 112 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 WI2-2373I1.2A0A1W2PRP0 233 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 RBBP9O75884 186 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 HLA-DRB1P01911 266 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 APOA2P02652 100 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
PNN-203ENST00000554117 HSMCR30P0CW71 290 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ARSBP15848 533 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ECI1P42126 302 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ZNF134P52741 427 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 F2RL1P55085 397 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 DEFB136Q30KP8 78 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 OGFRL1Q5TC84 451 aaPredicted RBP8.44□□□□□ -1.06
PNN-203ENST00000554117 RNLSQ5VYX0 342 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ZNF485Q8NCK3 441 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 RAX2Q96IS3 184 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 DUX3Q96PT4 197 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 FAAP24Q9BTP7 215 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 CENPOQ9BU64 300 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 CCDC90BQ9GZT6 254 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 OR51J1Q9H342 316 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 ZNF221Q9UK13 617 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 SORL1Q92673 2214 aa8.44□□□□□ -1.06
PNN-203ENST00000554117 SAA2-SAA4A0A096LPE2 208 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 ZNF736B4DX44 427 aaPredicted RBP8.43□□□□□ -1.06
PNN-203ENST00000554117 CASQ2O14958 399 aaPredicted RBP8.43□□□□□ -1.06
PNN-203ENST00000554117 GNAO1P09471 354 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 SAA2P0DJI9 122 aaPredicted RBP8.43□□□□□ -1.06
PNN-203ENST00000554117 CHATP28329 748 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 VHLP40337 213 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 KRTAP10-11P60412 298 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 HMGN3Q15651 99 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 ECSCRQ19T08 205 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 C5orf64Q2M2E5 130 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 ZNF260Q3ZCT1 412 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 ZNF833PQ6ZTB9 187 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 C6orf201Q7Z4U5 140 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 RNF152Q8N8N0 203 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 NABP2Q9BQ15 211 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 HSPB9Q9BQS6 159 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 SULT4A1Q9BR01 284 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 MRPL20Q9BYC9 149 aaKnown RBP8.43□□□□□ -1.06
PNN-203ENST00000554117 PLSCR3Q9NRY6 295 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 SLC23A1Q9UHI7 598 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 BLOC1S6Q9UL45 172 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 WASHC3Q9Y3C0 194 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 BOLA1Q9Y3E2 137 aa8.43□□□□□ -1.06
PNN-203ENST00000554117 A0A1W2PN81 502 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms