RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NOL4LQ96MY1 436 aaPredicted RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 P2RX4Q99571 388 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 CHCHD6Q9BRQ6 235 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 PLSCR3Q9NRY6 295 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MBNL3Q9NUK0 354 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 TXNL4BQ9NX01 149 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 ZMAT5Q9UDW3 170 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 MRPS28Q9Y2Q9 187 aaKnown RBP5.21□□□□□ -1.58
SLIRP-203ENST00000554074 V9GY05 133 aa5.21□□□□□ -1.58
SLIRP-203ENST00000554074 A0A1W2PP11 408 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 A0A1W2PPE3 182 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 C12orf77C9JDV5 145 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 SLC17A2O00624 439 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 SLC22A1O15245 554 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 LANCL1O43813 399 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 AIREO43918 545 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 MAS1P04201 325 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 ELANEP08246 267 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 MGMTP16455 207 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 RAB3BP20337 219 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 FUT3P21217 361 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 CDX1P47902 265 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-203ENST00000554074 KRTAP10-11P60412 298 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 FOXE3Q13461 319 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 HNF4GQ14541 408 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 PNLIPRP3Q17RR3 467 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 AWAT2Q6E213 333 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 GLIPR1L1Q6UWM5 242 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 C8orf86Q6ZUL3 223 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 GPR141Q7Z602 305 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 ANKRD13BQ86YJ7 626 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 JAGN1Q8N5M9 183 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 FAM71E2Q8N5Q1 922 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 Q8N9W7 124 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 KLHL30-AS1Q8NEE0 82 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 KCNG3Q8TAE7 436 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 PTX4Q96A99 478 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 ORAI1Q96D31 301 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 Q96M66 194 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 S1PR3Q99500 378 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 CST11Q9H112 138 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 ETAA1Q9NY74 926 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 GNG12Q9UBI6 72 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 TRAPPC2LQ9UL33 140 aa5.2□□□□□ -1.58
SLIRP-203ENST00000554074 IGHV3-43A0A0B4J1X8 118 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 IGHV3-72A0A0B4J1Y9 119 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 A0A1W2PPK0 400 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 WI2-2373I1.2A0A1W2PRP0 233 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 LINC01548A6NM66 108 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 IFITM5A6NNB3 132 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 NCBP2LA6PVI3 153 aaKnown RBP5.19□□□□□ -1.58
SLIRP-203ENST00000554074 NOTOA8MTQ0 251 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 NUDT19A8MXV4 375 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 SLC31A2O15432 143 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 PDCD6O75340 191 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 SCGNO76038 276 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 HBZP02008 142 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 IGF1P05019 195 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 TFAP2AP05549 437 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 OR5H8P0DN80 308 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 IGHV3-43DP0DP04 118 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 GADD45AP24522 165 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 HTR2CP28335 458 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 REG1BP48304 166 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF134P52741 427 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 TMBIM6P55061 237 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 HTD2P86397 168 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 CFHR3Q02985 330 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 LSAMPQ13449 338 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 KIR2DS1Q14954 304 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 RAB11BQ15907 218 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 MORN2Q502X0 79 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 CT45A1Q5HYN5 189 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 CXorf66Q5JRM2 361 aaPredicted RBP5.19□□□□□ -1.58
SLIRP-203ENST00000554074 VAX1Q5SQQ9 334 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 FAM27D1Q5T7N8 215 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 SIGIRRQ6IA17 410 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 C22orf42Q6IC83 251 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 OR8U1Q8NH10 309 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 OR4K15Q8NH41 348 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 CT45A3Q8NHU0 189 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 RAB2BQ8WUD1 216 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 CCDC107Q8WV48 283 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 B9D2Q9BPU9 175 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 RASL11BQ9BPW5 248 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 URM1Q9BTM9 101 aaKnown RBP5.19□□□□□ -1.58
SLIRP-203ENST00000554074 FUNDC2Q9BWH2 189 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 SELENOIQ9C0D9 397 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 NDUFA13Q9P0J0 144 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 STEAP1Q9UHE8 339 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 LINC00527Q9UJ94 153 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 JPT1Q9UK76 154 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 PEX16Q9Y5Y5 336 aa5.19□□□□□ -1.58
SLIRP-203ENST00000554074 TNCP24821 2201 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 LOC100506127A0A0U1RQW1 187 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF701M0R085 212 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-203ENST00000554074 CCL24O00175 119 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 YPEL1O60688 119 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RAMP3O60896 148 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 NOL3O60936 208 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms