RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ZNF660Q6AZW8 331 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 SLC38A6Q8IZM9 456 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 LINC00311Q8N616 119 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ZDHHC22Q8N966 263 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ZFAND1Q8TCF1 268 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 HIF1ANQ9NWT6 349 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ITGB1BP2Q9UKP3 347 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 C14orf166Q9Y224 244 aaKnown RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 IGHV2-26A0A0B4J1V2 119 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 TOR1AO14656 332 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 NDUFB6O95139 128 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 PGAM2P15259 253 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 BTCP35070 178 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 PAX8Q06710 450 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 GNMTQ14749 295 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 FAM71F2Q6NXP2 309 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 C11orf88Q6PI97 169 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 SLC25A48Q6ZT89 311 aaKnown RBP11.88□□□□□ -0.51
SHMT2-210ENST00000553950 VMO1Q7Z5L0 202 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 ZBTB34Q8NCN2 500 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 BEND2Q8NDZ0 799 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 MSI2Q96DH6 328 aaKnown RBP11.88□□□□□ -0.51
SHMT2-210ENST00000553950 SUCNR1Q9BXA5 334 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 FXYD6Q9H0Q3 95 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 PIPOXQ9P0Z9 390 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 AUP1Q9Y679 476 aa11.88□□□□□ -0.51
SHMT2-210ENST00000553950 PDZD2O15018 2839 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 TGFAP01135 160 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 MMP9P14780 707 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF16P17020 682 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-210ENST00000553950 TAS2R31P59538 309 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 FXYD4P59646 89 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 ABHD12Q8N2K0 398 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF645Q8N7E2 425 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 Q8N7P7 452 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 CCDC71LQ8N9Z2 235 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 OR10X1Q8NGY0 326 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 AKR1E2Q96JD6 320 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 PCGF1Q9BSM1 259 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 MMP26Q9NRE1 261 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
SHMT2-210ENST00000553950 J3QR06 171 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 RAB29O14966 203 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 TXNL1O43396 289 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 MMP23AO75900 390 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 TCRBP04435 133 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-210ENST00000553950 CEACAM3P40198 252 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 GPR12P47775 334 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 GNG10P50151 68 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
SHMT2-210ENST00000553950 ABCA11PQ4W5N1 156 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 AADACL3Q5VUY0 350 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 SPNS3Q6ZMD2 512 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF439Q8NDP4 499 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 DUSP18Q8NEJ0 188 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 OR11H6Q8NGC7 330 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 UPRTQ96BW1 309 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 SLC5A7Q9GZV3 580 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 C20orf85Q9H1P6 137 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 OR2D2Q9H210 308 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 MMP28Q9H239 520 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 PSG11Q9UQ72 335 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 MED13LQ71F56 2210 aa11.86□□□□□ -0.51
SHMT2-210ENST00000553950 ITPR3Q14573 2671 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 SETXQ7Z333 2677 aaKnown RBP11.85□□□□□ -0.51
SHMT2-210ENST00000553950 MYO9AB2RTY4 2548 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 PIGBOS1A0A0B4J2F0 54 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 OR5H14A6NHG9 310 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 RNF212BA8MTL3 300 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 GPR31O00270 319 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 CTSDP07339 412 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-210ENST00000553950 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 COX7A1P24310 79 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 CCR6P51684 374 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 UBE2E1P51965 193 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF137PP52743 207 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 RAG2P55895 527 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 BPIFB3P59826 476 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 HLA-DRB5Q30154 266 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 MINOS1Q5TGZ0 78 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 GPR157Q5UAW9 335 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms