RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 IGHV3-72A0A0B4J1Y9 119 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGHV7-4-1A0A0J9YVY3 117 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 A0A1B0GVX0 72 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TMEM223A0PJW6 202 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 OR6C6A6NF89 314 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 A8MWL6 223 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 C4orf51C9J302 202 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZNF878C9JN71 531 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 F5H5P2 479 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ISLRO14498 428 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 KLRC4O43908 158 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PDE6DO43924 150 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 DEDDO75618 318 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 OR2B3O76000 313 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 OR7C1O76099 320 aaPredicted RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 NRASP01111 189 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 HRASP01112 189 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 KRASP01116 189 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IFNA21P01568 189 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IFNA14P01570 189 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGKV1-39P01597 117 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGLV1-47P01700 117 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGKV1D-39P04432 117 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 HLA-DQB2P05538 268 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 SERPINA7P05543 415 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ADRA2AP08913 450 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 CST2P09228 141 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 CTSEP14091 401 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZNF823P16415 610 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 MARCKSL1P49006 195 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 CRYBA4P53673 196 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TMEM33P57088 247 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 RAB5BP61020 215 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 GNB2P62879 340 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PSG4Q00888 419 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 SYCNQ0VAF6 134 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PSG7Q13046 419 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 EBPQ15125 230 aaKnown RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 KCNJ8Q15842 424 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZNF658BQ4V348 819 aaPredicted RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 TEX30Q5JUR7 227 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 FAM201AQ5SY85 155 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZFP1Q6P2D0 407 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 EBLN2Q6P2I7 272 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGFL2Q6UWQ7 119 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 Q6ZRU5 148 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TMPPEQ6ZT21 453 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 LYG2Q86SG7 212 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 BAP18Q8IXM2 172 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZNF567Q8N184 647 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TMEM86BQ8N661 226 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ANKRD29Q8N6D5 301 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 Q8N976 141 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 OR2T27Q8NH04 317 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 CIRBP-AS1Q8TBR5 109 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PYDC1Q8WXC3 89 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 KLK6Q92876 244 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 YIPF5Q969M3 257 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 FAM104AQ969W3 186 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 BORCS7Q96B45 105 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 GALMQ96C23 342 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 C12orf43Q96C57 262 aaKnown RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 SFRP2Q96HF1 295 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ABHD14BQ96IU4 210 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 LINC00477Q96M19 166 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 THTPAQ9BU02 230 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TSSK6Q9BXA6 273 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 ZNF717Q9BY31 904 aaPredicted RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 GTSF1LQ9H1H1 148 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 MED28Q9H204 178 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PLEKHF2Q9H8W4 249 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 CXorf21Q9HAI6 301 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 KCNIP2Q9NS61 270 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 C14orf105Q9NVL8 296 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TAS2R1Q9NYW7 299 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 RWDD2AQ9UIY3 292 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 HHLA2Q9UM44 414 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 NEU3Q9UQ49 428 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 WASHC3Q9Y3C0 194 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PCYT1BQ9Y5K3 369 aaPredicted RBP1.5□□□□□ -2.17
SRP54-204ENST00000553923 PXMP4Q9Y6I8 212 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TRIOBPQ9H2D6 2365 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 IGHV1-45A0A0A0MS14 117 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 TMED7-TICAM2A0A0A6YYA0 188 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 IGKV1-6A0A0C4DH72 117 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 IGHV3-64DA0A0J9YX35 117 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 A0A1B0GV50 99 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 LOC105371267A0A1B0GV96 52 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 NKX2-6A6NCS4 301 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR4C46A6NHA9 309 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNF850A8MQ14 1090 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 K7ERS5 55 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 BHLHE40O14503 412 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 CRYZL1O95825 349 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 HAND1O96004 215 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 IFNA1P01562 189 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 HLA-DQA1P01909 254 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 FGF6P10767 208 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 HSPA9P38646 679 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR1E2P47887 323 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms