RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 RAB40CQ96S21 281 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 CACNA1HO95180 2353 aa12.31□□□□□ -0.44
ACTN1-211ENST00000553882 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-211ENST00000553882 DFFBO76075 338 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 FGF8P55075 233 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-211ENST00000553882 DLK1P80370 383 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
ACTN1-211ENST00000553882 LCN15Q6UWW0 184 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF429Q86V71 674 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 SMDT1Q9H4I9 107 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 UBE2CO00762 179 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 CEACAM1P13688 526 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 UBE2NP61088 152 aaKnown RBP12.3□□□□□ -0.44
ACTN1-211ENST00000553882 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 DRAM1Q8N682 238 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 OR8G5Q8NG78 346 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 IFT22Q9H7X7 185 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 POLDIP2Q9Y2S7 368 aa12.3□□□□□ -0.44
ACTN1-211ENST00000553882 PSPNO60542 156 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 WISP2O76076 250 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 IGHV1-2P23083 117 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 PLA2G5P39877 138 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
ACTN1-211ENST00000553882 BPIFB3P59826 476 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 ERVK11-1P61568 191 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
ACTN1-211ENST00000553882 TTC28Q96AY4 2481 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 WNT9BO14905 357 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 PSG7Q13046 419 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-211ENST00000553882 HAPLN4Q86UW8 402 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 SNIP1Q8TAD8 396 aaKnown RBP12.29□□□□□ -0.44
ACTN1-211ENST00000553882 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
ACTN1-211ENST00000553882 LIN7CQ9NUP9 197 aaKnown RBP12.29□□□□□ -0.44
ACTN1-211ENST00000553882 CNOT1A5YKK6 2376 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 NPIPB11E5RHQ5 1161 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 RAMP3O60896 148 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MRPL49Q13405 166 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF506Q5JVG8 444 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MUCL1Q96DR8 90 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 RBMXL1Q96E39 390 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 OBP2BQ9NPH6 170 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 SMG1Q96Q15 3661 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MAP1BP46821 2468 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 SH2D1BO14796 132 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 OR8U8P0C7N1 319 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 SLC25A6P12236 298 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MPV17P39210 176 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 ELLP55199 621 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 RAB2AP61019 212 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 RAB11AP62491 216 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 TLE1Q04724 770 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 HEPN1Q6WQI6 88 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 Q8IYB0 196 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 LSM10Q969L4 123 aaKnown RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 TMEM9BQ9NQ34 198 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
ACTN1-211ENST00000553882 RP1L1Q8IWN7 2480 aaPredicted RBP12.28□□□□□ -0.44
ACTN1-211ENST00000553882 AGFG2O95081 481 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 KRASP01116 189 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 HBE1P02100 147 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 OR3A1P47881 315 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 NCMAPQ5T1S8 102 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 OR8G2PQ6IF36 304 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 FGFRL1Q8N441 504 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 ZNF525Q8N782 197 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 CNEP1R1Q8N9A8 125 aa12.27□□□□□ -0.44
ACTN1-211ENST00000553882 HAND1O96004 215 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 AESQ08117 197 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF146Q15072 292 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF726P1Q15940 193 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF787Q6DD87 383 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 TPRX1Q8N7U7 411 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 YPEL4Q96NS1 127 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 OR2D2Q9H210 308 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.45
ACTN1-211ENST00000553882 TREM2Q9NZC2 230 aa12.27□□□□□ -0.45
ACTN1-211ENST00000553882 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 IGHV2-5P01817 119 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 S100A9P06702 114 aaKnown RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 ERVFRD-1P60508 538 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms