RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 CACNA1SQ13698 1873 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 WRNQ14191 1432 aaPredicted RBP eCLIP2.72□□□□□ -1.97
TDP1-207ENST00000553617 HERPUD1Q15011 391 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR8B8Q15620 311 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 CEACAM16Q2WEN9 425 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RSBN1Q5VWQ0 802 aaPredicted RBP2.72□□□□□ -1.97
TDP1-207ENST00000553617 STEAP4Q687X5 459 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ALKAL1Q6UXT8 129 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RNF165Q6ZSG1 346 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 GOLT1AQ6ZVE7 132 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 DEFB128Q7Z7B8 93 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OOSP2Q86WS3 158 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TGIF2LYQ8IUE0 185 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ZFP41Q8N8Y5 198 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 C20orf203Q8NBC4 194 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR4E2Q8NGC2 313 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR4M1Q8NGD0 313 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR10D3Q8NH80 312 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR1S1Q8NH92 325 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TERB2Q8NHR7 220 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ZNF675Q8TD23 568 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 GPR119Q8TDV5 335 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 BLNKQ8WV28 456 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 FAM151AQ8WW52 585 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 MBD3L1Q8WWY6 194 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 SRSF12Q8WXF0 261 aaKnown RBP2.72□□□□□ -1.97
TDP1-207ENST00000553617 DCUN1D4Q92564 292 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ARL11Q969Q4 196 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TMEM230Q96A57 120 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PTX4Q96A99 478 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TM4SF18Q96CE8 201 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ACY3Q96HD9 319 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 CNBD2Q96M20 576 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RNF157Q96PX1 679 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR52B2Q96RD2 323 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 PITX2Q99697 317 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ZNF649Q9BS31 505 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 DOHHQ9BU89 302 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RNASE7Q9H1E1 156 aaKnown RBP2.72□□□□□ -1.97
TDP1-207ENST00000553617 OR51E2Q9H255 320 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 RPS10P5Q9NQ39 176 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 DMAC2Q9NW81 257 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 SSR3Q9UNL2 185 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 HDGFL3Q9Y3E1 203 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 UBIAD1Q9Y5Z9 338 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 C2orf16Q68DN1 1984 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 ADAMTSL3P82987 1691 aa2.72□□□□□ -1.97
TDP1-207ENST00000553617 TDRD6O60522 2096 aaKnown RBP2.72□□□□□ -1.97
TDP1-207ENST00000553617 CECR2Q9BXF3 1484 aa2.71□□□□□ -1.97
TDP1-207ENST00000553617 TRAV36DV7A0A075B6V5 113 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 A0A0X1KG70 313 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 FAM236DA0A1B0GTK5 79 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 TEX50A0A1B0GTY4 177 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 A0A1B0GV50 99 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 hADV38S2A0JD32 116 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 J3KT08 172 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 M0R143 59 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ZNF207O43670 478 aaKnown RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 REM1O75628 298 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ARL6IP5O75915 188 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 CDRT1O95170 752 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 IFNA17P01571 189 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 IGKV1D-16P01601 117 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 FAM236CP0DP71 79 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ZNF30P17039 623 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 RCC1P18754 421 aaPredicted RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 TCN2P20062 427 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 RAB3BP20337 219 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 CDK2P24941 298 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 MIPP30301 263 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 APLNRP35414 380 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 MARCKSL1P49006 195 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 RPS21P63220 83 aaKnown RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 SELENOWP63302 87 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 MXD1Q05195 221 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 REG3AQ06141 175 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 PLCXD2Q0VAA5 305 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ZNF266Q14584 549 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 IHHQ14623 411 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 IAH1Q2TAA2 248 aaPredicted RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 LRRC10Q5BKY1 277 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 TMEM255AQ5JRV8 349 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ARL9Q6T311 187 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 BAP18Q8IXM2 172 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 PDZD9Q8IXQ8 264 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 C4orf33Q8N1A6 199 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 SLC35G3Q8N808 338 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 GDPD1Q8N9F7 314 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 GPR26Q8NDV2 337 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 NPBQ8NG41 125 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 FMC1Q96HJ9 113 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 SLC35G5Q96KT7 338 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 GPR82Q96P67 336 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 TP53RKQ96S44 253 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 LXNQ9BS40 222 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 C20orf27Q9GZN8 174 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 ACER3Q9NUN7 267 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 UQCC1Q9NVA1 299 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms