RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 USF1P22415 310 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 TAS2R30P59541 319 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TAS2R19P59542 299 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 KRTDAPP60985 99 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 GNG3P63215 75 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ADAM8P78325 824 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SSBP2P81877 361 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 KLF9Q13886 244 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 HLA-BQ31612 363 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 FHL5Q5TD97 284 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 BCDIN3DQ7Z5W3 292 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 GKN2Q86XP6 184 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TCTEX1D1Q8N7M0 179 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 RNF133Q8WVZ7 376 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 MAL2Q969L2 176 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 STARD4Q96DR4 205 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ANAPC13Q9BS18 74 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ABHD6Q9BV23 337 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TVP23BQ9NYZ1 205 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 REV3LO60673 3130 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 EXPH5Q8NEV8 1989 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TRAV14DV4A0A0A6YYC5 116 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TRDV1A0A1B0GX56 115 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR2T8A6NH00 312 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SNURFLB1AK76 121 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ERI3O43414 337 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 CEACAM4O75871 244 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ETHE1O95571 254 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ADRA2AP08913 450 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR5H8P0DN80 308 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 MED14OSP0DP75 135 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 ATF1P18846 271 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 PEBP1P30086 187 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 PPIFP30405 207 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 DUTP33316 252 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 S100A3P33764 101 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SSTR5P35346 364 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 PSG6Q00889 435 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 PRDX1Q06830 199 aaKnown RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 ZNF154Q13106 437 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 P2RY6Q15077 328 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 HIST3H3Q16695 136 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 TMEM128Q5BJH2 165 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 FAM90A2PQ658T7 463 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 FAM71F2Q6NXP2 309 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 PRSS54Q6PEW0 395 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CSNK1A1LQ8N752 337 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LINC01555Q8NAE3 123 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 GPR32P1Q8NGA4 272 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR2A1Q8NGT9 310 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 OR4X1Q8NH49 305 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LYPD6BQ8NI32 183 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SMPDL3BQ92485 455 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 SLC25A21Q9BQT8 299 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 WDR54Q9H977 334 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 LYRM4Q9HD34 91 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 WSB2Q9NYS7 404 aaPredicted RBP3.46□□□□□ -1.86
RDH11-204ENST00000553578 WIPI2Q9Y4P8 454 aa3.46□□□□□ -1.86
RDH11-204ENST00000553578 CCDC88CQ9P219 2028 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CACNA1CQ13936 2221 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 P2RY10O00398 339 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 FOXS1O43638 330 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 VENTXO95231 258 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 MAS1P04201 325 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CD37P11049 281 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 PI3P19957 117 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NTF3P20783 257 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NPY1RP25929 384 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 GABRA3P34903 492 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CLDN17P56750 224 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 HSD52Q0P140 79 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 RGNQ15493 299 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SLC25A35Q3KQZ1 300 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SFXN4Q6P4A7 337 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 MOB1BQ7L9L4 216 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TMPRSS12Q86WS5 348 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CDC20BQ86Y33 519 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 C10orf111Q8N326 155 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 OR13G1Q8NGZ3 307 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NEIL2Q969S2 332 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 LIME1Q9H400 295 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TAF9BQ9HBM6 251 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 Q9N2J8 555 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 ELOVL5Q9NYP7 299 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KLK11Q9UBX7 282 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NAT8Q9UHE5 227 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 ZNF391Q9UJN7 358 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SDK1Q7Z5N4 2213 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CHD7Q9P2D1 2997 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KMT2EQ8IZD2 1858 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 F6UB75 175 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 FCN3O75636 299 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NDUFB6O95139 128 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CT45A8P0DMV1 189 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms