RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TRDCB7Z8K6 153 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 HSPA12AO43301 675 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 TMEM127O75204 238 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 GAPDHP04406 335 aaKnown RBP18.3■□□□□ 0.52
TDP1-206ENST00000553569 ZNF816Q0VGE8 651 aaPredicted RBP18.3■□□□□ 0.52
TDP1-206ENST00000553569 CTF1Q16619 201 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 MOB3BQ86TA1 216 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 LINC01006Q8NI28 216 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 NPFFR1Q9GZQ6 430 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 MMP24Q9Y5R2 645 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 DNHD1Q96M86 4753 aa18.3■□□□□ 0.52
TDP1-206ENST00000553569 CLPSL1A2RUU4 121 aa18.29■□□□□ 0.52
TDP1-206ENST00000553569 SNRNP70P08621 437 aaKnown RBP18.29■□□□□ 0.52
TDP1-206ENST00000553569 OR2AK2Q8NG84 335 aa18.29■□□□□ 0.52
TDP1-206ENST00000553569 NUDCD2Q8WVJ2 157 aa18.29■□□□□ 0.52
TDP1-206ENST00000553569 CFHR4Q92496 578 aa18.29■□□□□ 0.52
TDP1-206ENST00000553569 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.29■□□□□ 0.52
TDP1-206ENST00000553569 IGHV3-72A0A0B4J1Y9 119 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 IGHV1-3A0A0C4DH29 117 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 A0A1B0GUS0 222 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 ST8SIA5O15466 376 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 FABP7O15540 132 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 TSPAN9O75954 239 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 GSTP1P09211 210 aaKnown RBP18.28■□□□□ 0.52
TDP1-206ENST00000553569 GNG2P59768 71 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 HES1Q14469 280 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 ZNF260Q3ZCT1 412 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 HACD4Q5VWC8 232 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 TGIF2LXQ8IUE1 241 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 RTN4IP1Q8WWV3 396 aaPredicted RBP18.28■□□□□ 0.52
TDP1-206ENST00000553569 ST6GALNAC6Q969X2 333 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 SLC25A33Q9BSK2 321 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 PARP12Q9H0J9 701 aaKnown RBP18.28■□□□□ 0.52
TDP1-206ENST00000553569 RNF114Q9Y508 228 aa18.28■□□□□ 0.52
TDP1-206ENST00000553569 TRAV18A0A075B6X5 111 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 IGKV1-6A0A0C4DH72 117 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 HAX1O00165 279 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 LPLP06858 475 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 FAM106CPP0CH98 169 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 ZBTB25P24278 435 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 KIR2DS4P43632 304 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 ZNF137PP52743 207 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 KIR2DS1Q14954 304 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 HERPUD1Q15011 391 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 UBE2NLQ5JXB2 153 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 LY6G6FQ5SQ64 297 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 CLVS1Q8IUQ0 354 aaPredicted RBP18.27■□□□□ 0.52
TDP1-206ENST00000553569 SAMD12Q8N8I0 201 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 OR4A4PQ8NGN8 299 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 DCSTAMPQ9H295 470 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 C16orf95Q9H693 158 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 RANBP3Q9H6Z4 567 aaPredicted RBP18.27■□□□□ 0.52
TDP1-206ENST00000553569 SIGLEC9Q9Y336 463 aa18.27■□□□□ 0.52
TDP1-206ENST00000553569 BET1O15155 118 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 IGKV1D-33P01593 117 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 IGKV1-33P01594 117 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 GSTT2P0CG29 244 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 GSTT2BP0CG30 244 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 CEACAM6P40199 344 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 IFI27L2Q9H2X8 130 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 DIABLOQ9NR28 239 aa18.26■□□□□ 0.51
TDP1-206ENST00000553569 A0A0A6YYH2 397 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 A6NJ64 397 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 FAM90A9PA6NNJ1 464 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 OR2F2O95006 317 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 TMEM11P17152 192 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 DTYMKP23919 212 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 OR3A3P47888 321 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 HNF4GQ14541 408 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 PNLIPRP3Q17RR3 467 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 IGSF11Q5DX21 431 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 C16orf82Q7Z2V1 217 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 ODF3L1Q8IXM7 274 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 DTX3Q8N9I9 347 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 OR2T6Q8NHC8 308 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 WFDC12Q8WWY7 111 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 KCTD12Q96CX2 325 aaKnown RBP18.25■□□□□ 0.51
TDP1-206ENST00000553569 AKR1E2Q96JD6 320 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 RBM14Q96PK6 669 aaKnown RBP18.25■□□□□ 0.51
TDP1-206ENST00000553569 ZNF747Q9BV97 191 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 ST6GALNAC5Q9BVH7 336 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 ZNF702PQ9H963 129 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 COMMD3Q9UBI1 195 aa18.25■□□□□ 0.51
TDP1-206ENST00000553569 IGKV1D-8A0A087WSZ0 117 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 SAA2-SAA4A0A096LPE2 208 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 TXNL1O43396 289 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 LANCL1O43813 399 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 SAA2P0DJI9 122 aaPredicted RBP18.24■□□□□ 0.51
TDP1-206ENST00000553569 RPL5P46777 297 aaKnown RBP18.24■□□□□ 0.51
TDP1-206ENST00000553569 RORCP51449 518 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 PITPNAQ00169 270 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 HABP2Q14520 560 aaPredicted RBP18.24■□□□□ 0.51
TDP1-206ENST00000553569 THNSL2Q86YJ6 484 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 CABLES2Q9BTV7 478 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 ABCG5Q9H222 651 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 RDH8Q9NYR8 311 aa18.24■□□□□ 0.51
TDP1-206ENST00000553569 SSX5O60225 188 aa18.23■□□□□ 0.51
TDP1-206ENST00000553569 BLCAPP62952 87 aa18.23■□□□□ 0.51
TDP1-206ENST00000553569 ARSJQ5FYB0 599 aaPredicted RBP18.23■□□□□ 0.51
TDP1-206ENST00000553569 EDARADDQ8WWZ3 215 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms