RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-233	ENST00000552433	GNB3	P16520	340 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	ATP6V0C	P27449	155 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	PSMB9	P28065	219 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	BLVRB	P30043	206 aa	Predicted RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	GPR183	P32249	361 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	G6PC	P35575	357 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	GNG5	P63218	68 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	EIF5A	P63241	154 aa	Known RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SLC35A2	P78381	396 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	HIST1H1A	Q02539	215 aa	Predicted RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	CEACAM16	Q2WEN9	425 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	EPGN	Q6UW88	154 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	PNKD	Q8N490	385 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SAMD12	Q8N8I0	201 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	RELL2	Q8NC24	303 aa	Predicted RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR2T12	Q8NG77	320 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	C8orf46	Q8TAG6	207 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	THAP6	Q8TBB0	222 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	MRPL24	Q96A35	216 aa	Known RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	MALSU1	Q96EH3	234 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	ST6GAL2	Q96JF0	529 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SLC35E1	Q96K37	410 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR2M4	Q96R27	311 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	MRPL57	Q9BQC6	102 aa	Known RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	C1QTNF4	Q9BXJ3	329 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SMIM3	Q9BZL3	60 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	ULBP3	Q9BZM4	244 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	COA1	Q9GZY4	146 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	ISG20L2	Q9H9L3	353 aa	Known RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	MEPE	Q9NQ76	525 aa	Predicted RBP	5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SLC7A7	Q9UM01	511 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	CACNA1F	O60840	1977 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	SCN7A	Q01118	1682 aa		5.14	□□□□□ -1.59
LETMD1-233	ENST00000552433	KIF20B	Q96Q89	1820 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	IGHV2OR16-5	A0A0B4J2B6	119 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433		A0A0G2JN53	185 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	FAM240A	A0A1B0GVK7	77 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433		A0A1W2PP11	408 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	C15orf62	A8K5M9	175 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	YIF1A	O95070	293 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	LYPD3	O95274	346 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	LGALS2	P05162	132 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	HLA-DQB2	P05538	268 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	H1F0	P07305	194 aa	Known RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	CD48	P09326	243 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	ATF1	P18846	271 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	CNTFR	P26992	372 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	GALR1	P47211	349 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	CTBP2	P56545	445 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RPS25	P62851	125 aa	Known RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	POU3F1	Q03052	451 aa	Predicted RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	CAV1	Q03135	178 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	CLINT1	Q14677	625 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	P2RY6	Q15077	328 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	BATF	Q16520	125 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	ZNF404	Q494X3	552 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	LRRC37A5P	Q49AS3	106 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	DCAF12	Q5T6F0	453 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	EIF5AL1	Q6IS14	154 aa	Known RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RPL22L1	Q6P5R6	122 aa	Known RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	APOOL	Q6UXV4	268 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR4F17	Q8NGA8	305 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR4M1	Q8NGD0	313 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR1L1	Q8NH94	360 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	PLEKHB2	Q96CS7	222 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RTP4	Q96DX8	246 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	BTN2A3P	Q96KV6	586 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	PGLYRP3	Q96LB9	341 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	BMF	Q96LC9	184 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	HYLS1	Q96M11	299 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	LINC00052	Q96N35	136 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR4F4	Q96R69	305 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	F2RL3	Q96RI0	385 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	MCHR1	Q99705	422 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RARRES2	Q99969	163 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	REG4	Q9BYZ8	158 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	OR2D2	Q9H210	308 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RBKS	Q9H477	322 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	HES4	Q9HCC6	221 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	NRN1	Q9NPD7	142 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	RFNG	Q9Y644	331 aa		5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	EDC4	Q6P2E9	1401 aa	Known RBP	5.13	□□□□□ -1.59
LETMD1-233	ENST00000552433	TEX50	A0A1B0GTY4	177 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433		A6NDN8	102 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	EEF1E1-BLOC1S5	C9J1V9	151 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	SMKR1	H3BMG3	65 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	NME4	O00746	187 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	EEF1E1	O43324	174 aa	Known RBP	5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	NDUFC2	O95298	119 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	SCT	P09683	121 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	FAM157C	P0CG43	387 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	FAM106CP	P0CH98	169 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	MYOD1	P15172	320 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	BCL3	P20749	454 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	RPS3	P23396	243 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	GABRA3	P34903	492 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	OPRL1	P41146	370 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	REG1B	P48304	166 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	LHX2	P50458	406 aa		5.12	□□□□□ -1.59
LETMD1-233	ENST00000552433	SEC61A1	P61619	476 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms