RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 TMEM9BQ9NQ34 198 aa20.03■□□□□ 0.8
NPAS3-211ENST00000551634 C6orf15Q6UXA7 325 aaPredicted RBP20.02■□□□□ 0.8
NPAS3-211ENST00000551634 SSX7Q7RTT5 188 aa20.02■□□□□ 0.8
NPAS3-211ENST00000551634 CT55Q8WUE5 264 aa20.02■□□□□ 0.8
NPAS3-211ENST00000551634 HLA-CQ95604 372 aa20.02■□□□□ 0.8
NPAS3-211ENST00000551634 GFOD1Q9NXC2 390 aa20.02■□□□□ 0.8
NPAS3-211ENST00000551634 TIMM9Q9Y5J7 89 aa20.02■□□□□ 0.8
NPAS3-211ENST00000551634 MAP1LC3B2A6NCE7 125 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 CEBPZOSA8MTT3 80 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 PHOX2AO14813 284 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 FGF8P55075 233 aaPredicted RBP20.02■□□□□ 0.79
NPAS3-211ENST00000551634 PEAR1Q5VY43 1037 aaPredicted RBP20.02■□□□□ 0.79
NPAS3-211ENST00000551634 OR4C12Q96R67 309 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 MAP1LC3BQ9GZQ8 125 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 PPP1R3CQ9UQK1 317 aa20.02■□□□□ 0.79
NPAS3-211ENST00000551634 ZNF407Q9C0G0 2248 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 CER1O95813 267 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 C9orf152Q5JTZ5 239 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 GFI1BQ5VTD9 330 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 WDR25Q64LD2 544 aaPredicted RBP20.01■□□□□ 0.79
NPAS3-211ENST00000551634 TAF15Q92804 592 aaKnown RBP eCLIP20.01■□□□□ 0.79
NPAS3-211ENST00000551634 PRDM13Q9H4Q3 707 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 LILRA1O75019 489 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 ZNF497Q6ZNH5 498 aa20.01■□□□□ 0.79
NPAS3-211ENST00000551634 RBM7Q9Y580 266 aaKnown RBP20.01■□□□□ 0.79
NPAS3-211ENST00000551634 ASPMQ8IZT6 3477 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 NAT8Q9UHE5 227 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 NEURL1O76050 574 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 WNT5AP41221 380 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 DEFA6Q01524 100 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 CENPVQ7Z7K6 275 aaPredicted RBP20■□□□□ 0.79
NPAS3-211ENST00000551634 Q8IYB0 196 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 CDH20Q9HBT6 801 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 PITPNC1Q9UKF7 332 aa20■□□□□ 0.79
NPAS3-211ENST00000551634 ARGFXA6NJG6 315 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 RNF212BA8MTL3 300 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 NDUFS6O75380 124 aaKnown RBP19.99■□□□□ 0.79
NPAS3-211ENST00000551634 RHBDL1O75783 438 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 RD3LP0DJH9 198 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 CDPF1Q6NVV7 123 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 SLC39A9Q9NUM3 307 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 ZNF737O75373 536 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 SPANXN5Q5MJ07 72 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 CYP2G1PQ6ZSU1 146 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 THOC3Q96J01 351 aaKnown RBP19.99■□□□□ 0.79
NPAS3-211ENST00000551634 TRAPPC2LQ9UL33 140 aa19.99■□□□□ 0.79
NPAS3-211ENST00000551634 CELA3AP09093 270 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 SLC38A11Q08AI6 406 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 TMEM14EPQ6UXP3 125 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 TIPARPQ7Z3E1 657 aaKnown RBP19.98■□□□□ 0.79
NPAS3-211ENST00000551634 RBKSQ9H477 322 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 MBNL3Q9NUK0 354 aaKnown RBP19.98■□□□□ 0.79
NPAS3-211ENST00000551634 KCNS2Q9ULS6 477 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 DOCK10Q96BY6 2186 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 PATE3B3GLJ2 98 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 CA6P23280 308 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 LHX4Q969G2 390 aa19.98■□□□□ 0.79
NPAS3-211ENST00000551634 OR10A7Q8NGE5 316 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 SRD5A3Q9H8P0 318 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 WIPI2Q9Y4P8 454 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 ZNF16P17020 682 aaPredicted RBP19.97■□□□□ 0.79
NPAS3-211ENST00000551634 MEF2BQ02080 365 aaPredicted RBP19.97■□□□□ 0.79
NPAS3-211ENST00000551634 CLN3Q13286 438 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 PDZD11Q5EBL8 140 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 FGFRL1Q8N441 504 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 PYGO2Q9BRQ0 406 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 RTL8AQ9BWD3 113 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 KMT2EQ8IZD2 1858 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 PCSK5Q92824 1860 aa19.97■□□□□ 0.79
NPAS3-211ENST00000551634 FABP4P15090 132 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ATP6V1FQ16864 119 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 TMEM241Q24JQ0 296 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 NCR3LG1Q68D85 454 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 DRAM1Q8N682 238 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 SMIM7Q9BQ49 75 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 TMEM250H0YL14 139 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 WDR1O75083 606 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 OR2H2O95918 312 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 PGA5P0DJD9 388 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 RPP25LQ8N5L8 163 aaKnown RBP19.96■□□□□ 0.79
NPAS3-211ENST00000551634 SSX3Q99909 188 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ZPBPQ9BS86 351 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 A0A1W2PR80 420 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 KBTBD11O94819 623 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 JMJD7P0C870 316 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 GPX4P36969 197 aaPredicted RBP19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ELLP55199 621 aaPredicted RBP19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ERVK11-1P61568 191 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ABHD17BQ5VST6 288 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 PRR18Q8N4B5 295 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 ZBTB34Q8NCN2 500 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 POLDIP2Q9Y2S7 368 aa19.96■□□□□ 0.79
NPAS3-211ENST00000551634 UBE2L5PA0A1B0GUS4 154 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 TNFRSF9Q07011 255 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 LOXL2Q9Y4K0 774 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 TRAV39A0A0B4J263 110 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 SIRPB1O00241 398 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 PFN1P07737 140 aaKnown RBP19.95■□□□□ 0.78
NPAS3-211ENST00000551634 CEACAM6P40199 344 aa19.95■□□□□ 0.78
NPAS3-211ENST00000551634 HSPB7Q9UBY9 170 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms