RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 S100A10P60903 97 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 ZNF680Q8NEM1 530 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 TMEM56Q96MV1 263 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 OR2D2Q9H210 308 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 TMEM56-RWDD3S4R434 201 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 COL12A1Q99715 3063 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 LYPD2Q6UXB3 125 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 ZNF808Q8N4W9 903 aaPredicted RBP16.34■□□□□ 0.21
SSH1-209ENST00000551165 DCUN1D4Q92564 292 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 PPIAL4EA0A075B759 164 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 A0A1W2PPR1 153 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 PPIAL4DF5H284 164 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 LGALS8O00214 317 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 SIGLEC5O15389 551 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 CDS2O95674 445 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 PPIAL4FP0DN26 164 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 UCP1P25874 307 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 LINC00205P59089 165 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 CR1LQ2VPA4 569 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 OR1S1Q8NH92 325 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 PPIAL4AQ9Y536 164 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 MSGN1A6NI15 193 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 ST8SIA5O15466 376 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 SPINT2O43291 252 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 PRB1P04280 392 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 CGB3P0DN86 165 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 CGB7P0DN87 165 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 GZMHP20718 246 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 C17orf58Q2M2W7 97 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 ZNF695Q8IW36 515 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 ABHD14BQ96IU4 210 aa16.33■□□□□ 0.2
SSH1-209ENST00000551165 H0Y980 276 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 SCGB1D2O95969 90 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 ZNF16P17020 682 aaPredicted RBP16.32■□□□□ 0.2
SSH1-209ENST00000551165 OR5D13Q8NGL4 314 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 PCNPQ8WW12 178 aaKnown RBP16.32■□□□□ 0.2
SSH1-209ENST00000551165 NINJ1Q92982 152 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 LEAP2Q969E1 77 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 C14orf79Q96F83 325 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 TOLLIPQ9H0E2 274 aa16.32■□□□□ 0.2
SSH1-209ENST00000551165 IGHV1-69-2A0A0G2JMI3 117 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 LOXL3P58215 753 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 ERVFRD-1P60508 538 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 EXOSC2Q13868 293 aaKnown RBP16.31■□□□□ 0.2
SSH1-209ENST00000551165 CALYQ9NYX4 217 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 TANC2Q9HCD6 1990 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 TRAV38-1A0A0B4J264 116 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 LY6HO94772 140 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 IGKV1-39P01597 117 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 MBPP02686 304 aaPredicted RBP16.31■□□□□ 0.2
SSH1-209ENST00000551165 IGKV1D-39P04432 117 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 COL8A2P25067 703 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 HTR2BP41595 481 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 HTD2P86397 168 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 PRSS54Q6PEW0 395 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 BTNL3Q6UXE8 466 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 BBC3Q96PG8 261 aaPredicted RBP16.31■□□□□ 0.2
SSH1-209ENST00000551165 AGMATQ9BSE5 352 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 PSG11Q9UQ72 335 aa16.31■□□□□ 0.2
SSH1-209ENST00000551165 A0A0G2JRQ6 117 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 NDUFB7P17568 137 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 ZNF134P52741 427 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 RPL30P62888 115 aaKnown RBP16.3■□□□□ 0.2
SSH1-209ENST00000551165 IZUMO4Q1ZYL8 232 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 KCNRGQ8N5I3 272 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 ZNF645Q8N7E2 425 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 AKR1E2Q96JD6 320 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 CNTNAP3BQ96NU0 1288 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 CNTNAP3Q9BZ76 1288 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 LSM5Q9Y4Y9 91 aaKnown RBP16.3■□□□□ 0.2
SSH1-209ENST00000551165 FLNCQ14315 2725 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 TNFRSF13BO14836 293 aaPredicted RBP16.3■□□□□ 0.2
SSH1-209ENST00000551165 MMP23AO75900 390 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 MORN2Q502X0 79 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 ZNF585BQ52M93 769 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 TRAT1Q6PIZ9 186 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 ACOT7LQ6ZUV0 252 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 C1orf87Q8N0U7 546 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 OR6C3Q9NZP0 311 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 GNG12Q9UBI6 72 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 USF3Q68DE3 2245 aa16.3■□□□□ 0.2
SSH1-209ENST00000551165 SOD3P08294 240 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 LYL1P12980 280 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 OR2B11Q5JQS5 317 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 RBPMSQ93062 196 aaKnown RBP16.29■□□□□ 0.2
SSH1-209ENST00000551165 FAM234AQ9H0X4 552 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 CTSZQ9UBR2 303 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 TMED3Q9Y3Q3 217 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 ADAM20O43506 726 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 EIF4EBP1Q13541 118 aaPredicted RBP16.29■□□□□ 0.2
SSH1-209ENST00000551165 ZNF767PQ75MW2 155 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 C19orf12Q9NSK7 152 aa16.29■□□□□ 0.2
SSH1-209ENST00000551165 SLC25A10Q9UBX3 287 aaPredicted RBP16.29■□□□□ 0.2
SSH1-209ENST00000551165 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 B8ZZF3 427 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 F2RL2O00254 374 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 SLC31A2O15432 143 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 PROP1O75360 226 aa16.28■□□□□ 0.2
SSH1-209ENST00000551165 INO80EQ8NBZ0 244 aaPredicted RBP16.28■□□□□ 0.2
SSH1-209ENST00000551165 SDHAF2Q9NX18 166 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms