RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SLC25A48Q6ZT89 311 aaKnown RBP17.39■□□□□ 0.37
NEK3-202ENST00000550841 LHFPL4Q7Z7J7 247 aa17.39■□□□□ 0.37
NEK3-202ENST00000550841 SIGLECL1Q8N7X8 197 aa17.39■□□□□ 0.37
NEK3-202ENST00000550841 OR2AK2Q8NG84 335 aa17.39■□□□□ 0.37
NEK3-202ENST00000550841 GINS4Q9BRT9 223 aa17.39■□□□□ 0.37
NEK3-202ENST00000550841 GHITMQ9H3K2 345 aa17.39■□□□□ 0.37
NEK3-202ENST00000550841 SOX21Q9Y651 276 aaPredicted RBP17.39■□□□□ 0.37
NEK3-202ENST00000550841 TRBV6-7A0A0A0MS04 114 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 TCF21O43680 179 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 GNMTQ14749 295 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 SSX2Q16385 188 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 AANATQ16613 207 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 IGSF11Q5DX21 431 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 CT45A1Q5HYN5 189 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 UTF1Q5T230 341 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 CCDC144NLQ6NUI1 221 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 LDLRAD3Q86YD5 345 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 GVQW1Q8N7I0 195 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 ZNF439Q8NDP4 499 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 CT45A3Q8NHU0 189 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 FCAMRQ8WWV6 532 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 ZNF48Q96MX3 618 aaPredicted RBP17.38■□□□□ 0.37
NEK3-202ENST00000550841 ABHD1Q96SE0 405 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 ABHD14AQ9BUJ0 271 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 TOLLIPQ9H0E2 274 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 DPAGT1Q9H3H5 408 aa17.38■□□□□ 0.37
NEK3-202ENST00000550841 IGKV1D-8A0A087WSZ0 117 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 IGKV1-6A0A0C4DH72 117 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 A0A1W2PPE3 182 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 RNF212BA8MTL3 300 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 CTDSPLO15194 276 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 RBBP9O75884 186 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 NAT1P18440 290 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 ZNF134P52741 427 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 BAMBIQ13145 260 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 HERPUD1Q15011 391 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 FAM216AQ8WUB2 273 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 RPEQ96AT9 228 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 AJUBAQ96IF1 538 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 OR1A1Q9P1Q5 309 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 ANAPC10Q9UM13 185 aa17.37■□□□□ 0.37
NEK3-202ENST00000550841 MEIS3P1A6NDR6 274 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 LY6LH3BQJ8 138 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 PTBP1P26599 531 aaKnown RBP eCLIP17.36■□□□□ 0.378e-14■■■□□ 15
NEK3-202ENST00000550841 RCVRNP35243 200 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 TPTE2P1Q5T6R2 138 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 FAM53AQ6NSI3 398 aaPredicted RBP17.36■□□□□ 0.37
NEK3-202ENST00000550841 TMEM86BQ8N661 226 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 OR6Q1Q8NGQ2 317 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 C17orf50Q8WW18 174 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 SSMEM1Q8WWF3 244 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 GCDHQ92947 438 aaPredicted RBP17.36■□□□□ 0.37
NEK3-202ENST00000550841 NECAP2Q9NVZ3 263 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 RDH8Q9NYR8 311 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 ZNRD1Q9P1U0 126 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 HILPDAQ9Y5L2 63 aa17.36■□□□□ 0.37
NEK3-202ENST00000550841 MDFIC2A0A1B0GVS7 189 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 BTBD17A6NE02 478 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 GABARAPH6UMI1 98 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 GAPDHP04406 335 aaKnown RBP17.35■□□□□ 0.37
NEK3-202ENST00000550841 OR3A3P47888 321 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 TAS2R46P59540 309 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 HILS1P60008 231 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 ACTBP60709 375 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 ACTG1P63261 375 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 CNPY1Q3B7I2 92 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 SPANXN2Q5MJ10 180 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 FAM131AQ6UXB0 335 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 LYG1Q8N1E2 194 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 OR5AP2Q8NGF4 316 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 TOMM40LQ969M1 308 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 SOSTQ9BQB4 213 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 ABCB10Q9NRK6 738 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 PIPOXQ9P0Z9 390 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 POMT1Q9Y6A1 747 aa17.35■□□□□ 0.37
NEK3-202ENST00000550841 SVEP1Q4LDE5 3571 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 SLC31A2O15432 143 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 BRS3P32247 399 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 SSBP1Q04837 148 aaKnown RBP17.34■□□□□ 0.37
NEK3-202ENST00000550841 LRRC75BQ2VPJ9 315 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 LDLRAD2Q5SZI1 272 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 OR5R1Q8NH85 324 aa17.34■□□□□ 0.37
NEK3-202ENST00000550841 C11orf54Q9H0W9 315 aaPredicted RBP17.34■□□□□ 0.37
NEK3-202ENST00000550841 VGLL3A8MV65 326 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 RAB29O14966 203 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 TXNL1O43396 289 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 IER3P46695 156 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 DYNLT3P51808 116 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 ZNF137PP52743 207 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 CDK10Q15131 360 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 CCDC190Q86UF4 302 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 H1FOOQ8IZA3 346 aaPredicted RBP17.33■□□□□ 0.36
NEK3-202ENST00000550841 OR8H3Q8N146 312 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 OR5H2Q8NGV7 314 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 OR52I2Q8NH67 350 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 TMEM158Q8WZ71 300 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 SNAPC3Q92966 411 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 SSX3Q99909 188 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 MTFP1Q9UDX5 166 aa17.33■□□□□ 0.36
NEK3-202ENST00000550841 ZNF221Q9UK13 617 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms