RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TCF19Q9Y242 345 aa18.12■□□□□ 0.49
BRF1-216ENST00000550208 IGKV1D-8A0A087WSZ0 117 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 A6NDX4 124 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 FABP7O15540 132 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 XRCC3O43542 346 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 EIF4EP06730 217 aaKnown RBP18.11■□□□□ 0.49
BRF1-216ENST00000550208 PTHLHP12272 177 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 CEACAM6P40199 344 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 RELBQ01201 579 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 CCDC144NLQ6NUI1 221 aa18.11■□□□□ 0.49
BRF1-216ENST00000550208 PARP12Q9H0J9 701 aaKnown RBP18.11■□□□□ 0.49
BRF1-216ENST00000550208 HPGDSO60760 199 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 GAPDHP04406 335 aaKnown RBP18.1■□□□□ 0.49
BRF1-216ENST00000550208 DTYMKP23919 212 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 IL3RAP26951 378 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 BRS3P32247 399 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 MNDAP41218 407 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 REG1BP48304 166 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 PITPNAQ00169 270 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 HERPUD1Q15011 391 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 SRSF7Q16629 238 aaKnown RBP eCLIP18.1■□□□□ 0.49
BRF1-216ENST00000550208 IGSF11Q5DX21 431 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 TMEM219Q86XT9 240 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 LYG1Q8N1E2 194 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 OR4A4PQ8NGN8 299 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 ISOC1Q96CN7 298 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 CMTM3Q96MX0 182 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 ABHD14AQ9BUJ0 271 aa18.1■□□□□ 0.49
BRF1-216ENST00000550208 A0A1W2PPI3 338 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 HSD17B6O14756 317 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 TIMM23O14925 209 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 HSPA12AO43301 675 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 ZBTB25P24278 435 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 KIR2DS4P43632 304 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 RAB7AP51149 207 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 ZNF816Q0VGE8 651 aaPredicted RBP18.09■□□□□ 0.49
BRF1-216ENST00000550208 KIR2DS1Q14954 304 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 MZT2AQ6P582 158 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 Q6ZS49 121 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 DRAM1Q8N682 238 aa18.09■□□□□ 0.49
BRF1-216ENST00000550208 H3BMQ9 156 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 ST8SIA5O15466 376 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 CHST1O43916 411 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 NOL3O60936 208 aaKnown RBP18.08■□□□□ 0.48
BRF1-216ENST00000550208 APOA1P02647 267 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 ELK1P19419 428 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 ARHGDIBP52566 201 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 RPL15P61313 204 aaKnown RBP18.08■□□□□ 0.48
BRF1-216ENST00000550208 FBLN7Q53RD9 439 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 DHRS7BQ6IAN0 325 aaPredicted RBP18.08■□□□□ 0.48
BRF1-216ENST00000550208 MOB3BQ86TA1 216 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 ODF3L1Q8IXM7 274 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 OR8H3Q8N146 312 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 OR2AK2Q8NG84 335 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 DYNC2LI1Q8TCX1 351 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 CAPSLQ8WWF8 208 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 AP3S1Q92572 193 aa18.08■□□□□ 0.48
BRF1-216ENST00000550208 C11orf54Q9H0W9 315 aaPredicted RBP18.08■□□□□ 0.48
BRF1-216ENST00000550208 IGHV1-3A0A0C4DH29 117 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 FAM90A9PA6NNJ1 464 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 BET1O15155 118 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 ZNF137PP52743 207 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 TAS2R20P59543 309 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 TMEM69Q5SWH9 247 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 OR56B4Q8NH76 319 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 RTN4IP1Q8WWV3 396 aaPredicted RBP18.07■□□□□ 0.48
BRF1-216ENST00000550208 CFHR4Q92496 578 aa18.07■□□□□ 0.48
BRF1-216ENST00000550208 TRBV6-7A0A0A0MS04 114 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 ITGB1BP1O14713 200 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 NDUFA7O95182 113 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 SOX6P35712 828 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 OR3A3P47888 321 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 FOXL1Q12952 345 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 LIAT1Q6ZQX7 453 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 Q6ZSV7 163 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 THNSL2Q86YJ6 484 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 GVQW1Q8N7I0 195 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 CABLES2Q9BTV7 478 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 TOLLIPQ9H0E2 274 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 IFI27L2Q9H2X8 130 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 RDH8Q9NYR8 311 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 PITPNC1Q9UKF7 332 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 RNF150Q9ULK6 438 aa18.06■□□□□ 0.48
BRF1-216ENST00000550208 IGHV3-72A0A0B4J1Y9 119 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 SMIM31A0A1B0GVY4 71 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 CCDC160A6NGH7 325 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 SNRNP70P08621 437 aaKnown RBP18.05■□□□□ 0.48
BRF1-216ENST00000550208 MDKP21741 143 aaPredicted RBP18.05■□□□□ 0.48
BRF1-216ENST00000550208 COMPP49747 757 aaPredicted RBP18.05■□□□□ 0.48
BRF1-216ENST00000550208 RAG2P55895 527 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 AWAT1Q58HT5 328 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 TGIF2LXQ8IUE1 241 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 OR10J5Q8NHC4 309 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 SPATA3Q8NHX4 192 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 RAB18Q9NP72 206 aa18.05■□□□□ 0.48
BRF1-216ENST00000550208 MRPS7Q9Y2R9 242 aaKnown RBP18.05■□□□□ 0.48
BRF1-216ENST00000550208 MEIS3P1A6NDR6 274 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 FAM25AB3EWG3 89 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 FAM25CB3EWG5 89 aa18.04■□□□□ 0.48
BRF1-216ENST00000550208 FAM25GB3EWG6 89 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms