RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 OR2AK2Q8NG84 335 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 YPEL2Q96QA6 119 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 HDHD3Q9BSH5 251 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 PECRQ9BY49 303 aa13.72□□□□□ -0.21
CHMP1A-208ENST00000550102 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 CD28P10747 220 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 RAB6AP20340 208 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 GADD45AP24522 165 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 CD1BP29016 333 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 PLA2G7Q13093 441 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 EBI3Q14213 229 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 C9orf152Q5JTZ5 239 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 NR2C2APQ86WQ0 139 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 OR2T10Q8NGZ9 312 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 RAB3CQ96E17 227 aa13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-208ENST00000550102 A0A0B4J203 849 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 SMIM30A4D0T7 59 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 NOTOA8MTQ0 251 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 TMEM50BP56557 158 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 PLAC9Q5JTB6 97 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 TPRA1Q86W33 373 aa13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
CHMP1A-208ENST00000550102 METTL21EPA6NDL7 271 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 MOSP00540 346 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 CD3GP09693 182 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 SLC2A2P11168 524 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 LSAMPQ13449 338 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 Q8N6K4 173 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 OR5AU1Q8NGC0 362 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 OR10R2Q8NGX6 335 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 FAM110DQ8TAY7 271 aaPredicted RBP13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 PTX4Q96A99 478 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 KCTD7Q96MP8 289 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 CHCHD6Q9BRQ6 235 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 OR51E2Q9H255 320 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 Q9N2K0 584 aa13.69□□□□□ -0.22
CHMP1A-208ENST00000550102 SAA2-SAA4A0A096LPE2 208 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 NCBP2LA6PVI3 153 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 SAA2P0DJI9 122 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 NSUN5P1Q3KNT7 163 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 MOGAT2Q3SYC2 334 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 FAM71F2Q6NXP2 309 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 CENPVQ7Z7K6 275 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 OR8H1Q8NGG4 311 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 CITED2Q99967 270 aaPredicted RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 MRPL20Q9BYC9 149 aaKnown RBP13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 IFI27L2Q9H2X8 130 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 SLC23A1Q9UHI7 598 aa13.68□□□□□ -0.22
CHMP1A-208ENST00000550102 LOC100506127A0A0U1RQW1 187 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 ZNF736B4DX44 427 aaPredicted RBP13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 MFNGO00587 321 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 ST8SIA5O15466 376 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 HSPA12AO43301 675 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 CD36P16671 472 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 ZBTB25P24278 435 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 ZNF833PQ6ZTB9 187 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 ODF3L1Q8IXM7 274 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 OR4X2Q8NGF9 303 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 EDARADDQ8WWZ3 215 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 LIN7CQ9NUP9 197 aaKnown RBP13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 OR1A1Q9P1Q5 309 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 KCNK7Q9Y2U2 307 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 PLXNB1O43157 2135 aa13.67□□□□□ -0.22
CHMP1A-208ENST00000550102 CMYA5Q8N3K9 4069 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 A0A075B6Q4 140 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 SERPINE3A8MV23 424 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 TRDCB7Z8K6 153 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 RAB27BO00194 218 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 ITGB1BP1O14713 200 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 OPN1MWP04001 364 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 FCGR3AP08637 254 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 OPN1MW2P0DN77 364 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 OPN1MW3P0DN78 364 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 GNB3P16520 340 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 SDC2P34741 201 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 OR3A3P47888 321 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 TIMM50Q3ZCQ8 353 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 SFXN4Q6P4A7 337 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 PARP12Q9H0J9 701 aaKnown RBP13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 ATG5Q9H1Y0 275 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 PIPOXQ9P0Z9 390 aa13.66□□□□□ -0.22
CHMP1A-208ENST00000550102 A0A087WXM4 84 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 PSMB11A5LHX3 300 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 RAB29O14966 203 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 SCTP09683 121 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 KIR2DS1Q14954 304 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 ARL6IP1Q15041 203 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 FOXRED2Q8IWF2 684 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 Q8N9W7 124 aa13.65□□□□□ -0.22
CHMP1A-208ENST00000550102 TSPAN14Q8NG11 270 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms