RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KRASP01116 189 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
LINC00661-204ENST00000549354 DEFA6Q01524 100 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 SPSB3Q6PJ21 355 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF100Q8IYN0 542 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 FDCSPQ8NFU4 85 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 MUCL1Q96DR8 90 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 OR2H1Q9GZK4 316 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 WNT5BQ9H1J7 359 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF665Q9H7R5 613 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 TREM2Q9NZC2 230 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 OR1A1Q9P1Q5 309 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 RAB1AP62820 205 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 GAMTQ14353 236 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 ELOBQ15370 118 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
LINC00661-204ENST00000549354 BTNL3Q6UXE8 466 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 MCEMP1Q8IX19 187 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF610Q8N9Z0 462 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 TCEAL7Q9BRU2 100 aa9.44□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF891A8MT65 544 aaPredicted RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 SCAF4O95104 1147 aaKnown RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 PSG2P11465 335 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ALDH3B1P43353 468 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 IDH3GP51553 393 aaPredicted RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 NKX6-1P78426 367 aaPredicted RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF816Q0VGE8 651 aaPredicted RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 PRDX4Q13162 271 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ARL6IP1Q15041 203 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF826PQ6ZT77 177 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 DPPA2Q7Z7J5 298 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 RPUSD4Q96CM3 377 aaKnown RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 SPRR3Q9UBC9 169 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF391Q9UJN7 358 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 TRGV5A0A0B4J1U4 118 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 A0A0G2JRQ6 117 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 A0A1B0GV90 55 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 PDCD6O75340 191 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 PRB4P10163 310 aaPredicted RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF266Q14584 549 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 IL13RA2Q14627 380 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 CNN3Q15417 329 aaKnown RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 GALNT14Q96FL9 552 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 NCOR2Q9Y618 2525 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 WISP2O76076 250 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 SRP19P09132 144 aaKnown RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 ZDHHC23Q8IYP9 409 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 CCDC71LQ8N9Z2 235 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 FRZBQ92765 325 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 MOB3AQ96BX8 217 aa9.43□□□□□ -0.9
LINC00661-204ENST00000549354 STRAPQ9Y3F4 350 aaKnown RBP9.43□□□□□ -0.9
LINC00661-204ENST00000549354 TRAPPC2LH3BP13 241 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 RRP8O43159 456 aaKnown RBP9.42□□□□□ -0.9
LINC00661-204ENST00000549354 CD55P08174 381 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 PGA5P0DJD9 388 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 FUT3P21217 361 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 CCL11P51671 97 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 ICAM4Q14773 271 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 OR4D5Q8NGN0 318 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 PRDM14Q9GZV8 571 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 TMED3Q9Y3Q3 217 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 IGF2RP11717 2491 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 YLPM1P49750 1951 aaKnown RBP9.42□□□□□ -0.9
LINC00661-204ENST00000549354 CEBPZOSA8MTT3 80 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 COX5BP10606 129 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 PRR31Q5SQ13 230 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 COLCA1Q6ZS62 124 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 LILRB2Q8N423 598 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 OR10V1Q8NGI7 309 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 ARV1Q9H2C2 271 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
LINC00661-204ENST00000549354 SMCO3A2RU48 225 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 TRDCB7Z8K6 153 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 HOXA5P20719 270 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 ECI1P42126 302 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 EDDM3AQ14507 147 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 STX12Q86Y82 276 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 SPSB1Q96BD6 273 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 OPA3Q9H6K4 179 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 MTCH1Q9NZJ7 389 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 CACNG5Q9UF02 275 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 TRAPPC2LQ9UL33 140 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
LINC00661-204ENST00000549354 IFNL4K9M1U5 179 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms