RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 OR10A3P58181 314 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 IL18Q14116 193 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 OXA1LQ15070 435 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 C17orf58Q2M2W7 97 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
CDX2-202ENST00000548877 UTF1Q5T230 341 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 PYHIN1Q6K0P9 492 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 Q6ZNX1 250 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 NR2C2APQ86WQ0 139 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 CENPSQ8N2Z9 138 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 DNAAF1Q8NEP3 725 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 OR5D14Q8NGL3 314 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 TOMM40LQ969M1 308 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 C10orf35Q96D05 121 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 LINC00574Q9H8X3 128 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
CDX2-202ENST00000548877 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
CDX2-202ENST00000548877 J3QR06 171 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 SH2D1BO14796 132 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 OR2H2O95918 312 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 INPP1P49441 399 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 RAB7AP51149 207 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 CFHR3Q02985 330 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 ODF4Q2M2E3 257 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 ZNF260Q3ZCT1 412 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 TRIQKQ629K1 86 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 LRRTM1Q86UE6 522 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 SERPINA12Q8IW75 414 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 CDH26Q8IXH8 852 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 POC5Q8NA72 575 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 C4orf3Q8WVX3 66 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 KIRREL1Q96J84 757 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 ABCG5Q9H222 651 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 STEAP1Q9UHE8 339 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
CDX2-202ENST00000548877 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 IGHG4P01861 327 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 SLC2A2P11168 524 aaPredicted RBP10.56□□□□□ -0.72
CDX2-202ENST00000548877 ZNF20P17024 532 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 IGFBP3P17936 291 aaPredicted RBP10.56□□□□□ -0.72
CDX2-202ENST00000548877 ELK1P19419 428 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 BCL3P20749 454 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 GPR12P47775 334 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 RBP2P50120 134 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 MRPS10P82664 201 aaKnown RBP10.56□□□□□ -0.72
CDX2-202ENST00000548877 AESQ08117 197 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 MADCAM1Q13477 382 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 RAB11BQ15907 218 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 ZNF79Q15937 498 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 Q8N402 240 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 Q8N6K4 173 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 MYOZ3Q8TDC0 251 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 S100A16Q96FQ6 103 aaKnown RBP10.56□□□□□ -0.72
CDX2-202ENST00000548877 COQ2Q96H96 371 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 NCOR1P1Q9H4R4 102 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 EDA2RQ9HAV5 297 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 PLEKHA1Q9HB21 404 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 LIN7CQ9NUP9 197 aaKnown RBP10.56□□□□□ -0.72
CDX2-202ENST00000548877 OR6C3Q9NZP0 311 aa10.56□□□□□ -0.72
CDX2-202ENST00000548877 SIRPB1O00241 398 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 SLC17A2O00624 439 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 SULT1B1O43704 296 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 CYB5AP00167 134 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 FRMD6-AS1P0C7T7 363 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 CD37P11049 281 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 IL7P13232 177 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 PRKACAP17612 351 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 ATP1B3P54709 279 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 IFITM3Q01628 133 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 HES1Q14469 280 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 RBM39Q14498 530 aaKnown RBP10.55□□□□□ -0.72
CDX2-202ENST00000548877 MZT2BQ6NZ67 158 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 ZNF429Q86V71 674 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 CHST4Q8NCG5 386 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 OR51A4Q8NGJ6 313 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 OR10AC1Q8NH08 325 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 LGALS14Q8TCE9 139 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 PP6455Q8WZ26 134 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 PPP1R14BQ96C90 147 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
CDX2-202ENST00000548877 UQCC2Q9BRT2 126 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 RHOFQ9HBH0 211 aa10.55□□□□□ -0.72
CDX2-202ENST00000548877 PLECQ15149 4684 aaKnown RBP10.54□□□□□ -0.72
CDX2-202ENST00000548877 TRAV8-7A0A075B6U6 113 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 CTDSPLO15194 276 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 MAGEB3O15480 346 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 IGKV1D-33P01593 117 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 IGKV1-33P01594 117 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 MAS1P04201 325 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms