RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PARP12Q9H0J9 701 aaKnown RBP12.56□□□□□ -0.4
DDX54-205ENST00000548786 C12orf4Q9NQ89 552 aa12.56□□□□□ -0.4
DDX54-205ENST00000548786 A0A1W2PRX2 142 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 NCBP2LA6PVI3 153 aaKnown RBP12.55□□□□□ -0.4
DDX54-205ENST00000548786 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 CLEC2LP0C7M8 214 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 GNB3P16520 340 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 CD36P16671 472 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 GALP22466 123 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 OR3A3P47888 321 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 HLA-DRB3P79483 266 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 HTD2P86397 168 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 Q3ZCU0 254 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 ZNF880Q6PDB4 577 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 MOB1BQ7L9L4 216 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 THNSL2Q86YJ6 484 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 OR2AK2Q8NG84 335 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 RAB3CQ96E17 227 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 EAF1Q96JC9 268 aaPredicted RBP12.55□□□□□ -0.4
DDX54-205ENST00000548786 CITED2Q99967 270 aaPredicted RBP12.55□□□□□ -0.4
DDX54-205ENST00000548786 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 OR1A1Q9P1Q5 309 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 SLC23A1Q9UHI7 598 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 DAPK2Q9UIK4 370 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 HSF4Q9ULV5 492 aa12.55□□□□□ -0.4
DDX54-205ENST00000548786 M0QZK8 103 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 RGS11O94810 467 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 SCTP09683 121 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 SNRPBP14678 240 aaKnown RBP12.54□□□□□ -0.4
DDX54-205ENST00000548786 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
DDX54-205ENST00000548786 SDC2P34741 201 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 MRPS15P82914 257 aaKnown RBP12.54□□□□□ -0.4
DDX54-205ENST00000548786 CENPVQ7Z7K6 275 aaPredicted RBP12.54□□□□□ -0.4
DDX54-205ENST00000548786 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 OR5AU1Q8NGC0 362 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 OR10R2Q8NGX6 335 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 MAFIPQ8WZ33 124 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 MRPL20Q9BYC9 149 aaKnown RBP12.54□□□□□ -0.4
DDX54-205ENST00000548786 ATG5Q9H1Y0 275 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 MMP27Q9H306 513 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 KCNK7Q9Y2U2 307 aa12.54□□□□□ -0.4
DDX54-205ENST00000548786 SAA2-SAA4A0A096LPE2 208 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 HSPA12AO43301 675 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 YPEL1O60688 119 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 CD3GP09693 182 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 SAA2P0DJI9 122 aaPredicted RBP12.53□□□□□ -0.4
DDX54-205ENST00000548786 ODF3L1Q8IXM7 274 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 TSPAN14Q8NG11 270 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 KCTD7Q96MP8 289 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 NOL4LQ96MY1 436 aaPredicted RBP12.53□□□□□ -0.4
DDX54-205ENST00000548786 YPEL2Q96QA6 119 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 RIMS4Q9H426 269 aaPredicted RBP12.53□□□□□ -0.4
DDX54-205ENST00000548786 Q9N2K0 584 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
DDX54-205ENST00000548786 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
DDX54-205ENST00000548786 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 MOSP00540 346 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 RAB6AP20340 208 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 TGFBR1P36897 503 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 CEACAM6P40199 344 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 RANBP1P43487 201 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 ZNF137PP52743 207 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 RPL39P5Q59GN2 51 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 STEAP3Q658P3 488 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 SFXN4Q6P4A7 337 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 LGALS14Q8TCE9 139 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
DDX54-205ENST00000548786 ABHD14BQ96IU4 210 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 IFI27L2Q9H2X8 130 aa12.52□□□□□ -0.41
DDX54-205ENST00000548786 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
DDX54-205ENST00000548786 ELF5Q9UKW6 265 aaPredicted RBP12.52□□□□□ -0.41
DDX54-205ENST00000548786 METTL21EPA6NDL7 271 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 RAB27BO00194 218 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 TXNL1O43396 289 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 LANCL1O43813 399 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 TNFAIP8O95379 198 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
DDX54-205ENST00000548786 CD1BP29016 333 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 LSAMPQ13449 338 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 ZNF329Q86UD4 541 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 TPRA1Q86W33 373 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 Q8N6K4 173 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 RNF150Q9ULK6 438 aa12.51□□□□□ -0.41
DDX54-205ENST00000548786 A0A087WXM4 84 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 LINC01548A6NM66 108 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 SERPINE3A8MV23 424 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 TRDCB7Z8K6 153 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 MFNGO00587 321 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 BET1O15155 118 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 FCGR3AP08637 254 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 ZBTB25P24278 435 aa12.5□□□□□ -0.41
DDX54-205ENST00000548786 F2RL1P55085 397 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms