RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 C11orf44Q8N8P7 122 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 PTX4Q96A99 478 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 SSR3Q9UNL2 185 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 GADD45AP24522 165 aa12.64□□□□□ -0.39
DDX54-204ENST00000546898 Q8N6K4 173 aa12.64□□□□□ -0.39
DDX54-204ENST00000546898 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
DDX54-204ENST00000546898 IL1F10Q8WWZ1 152 aa12.64□□□□□ -0.39
DDX54-204ENST00000546898 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
DDX54-204ENST00000546898 CMSS1Q9BQ75 279 aaKnown RBP12.64□□□□□ -0.39
DDX54-204ENST00000546898 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 METTL21EPA6NDL7 271 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 NOTOA8MTQ0 251 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 ITGB1BP1O14713 200 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 CD28P10747 220 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 MRPS15P82914 257 aaKnown RBP12.63□□□□□ -0.39
DDX54-204ENST00000546898 HNF4GQ14541 408 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 PLAC9Q5JTB6 97 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 C9orf152Q5JTZ5 239 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 FAM71F2Q6NXP2 309 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 C5orf24Q7Z6I8 188 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 NDUFA11Q86Y39 141 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 OR8H1Q8NGG4 311 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 RAB3CQ96E17 227 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 HDHD3Q9BSH5 251 aaPredicted RBP12.63□□□□□ -0.39
DDX54-204ENST00000546898 Q9N2K0 584 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
DDX54-204ENST00000546898 SH2D7A6NKC9 451 aaPredicted RBP12.62□□□□□ -0.39
DDX54-204ENST00000546898 WIPF1O43516 503 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 MOSP00540 346 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 CD3GP09693 182 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 PLA2G7Q13093 441 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 LSAMPQ13449 338 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 NEDD8Q15843 81 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 OR10R2Q8NGX6 335 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 OR51E2Q9H255 320 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 LIN7CQ9NUP9 197 aaKnown RBP12.62□□□□□ -0.39
DDX54-204ENST00000546898 MEGF8Q7Z7M0 2845 aa12.62□□□□□ -0.39
DDX54-204ENST00000546898 RAB27BO00194 218 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 MFNGO00587 321 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 IGHG2P01859 326 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 ZBTB25P24278 435 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 CD83Q01151 205 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 MOGAT2Q3SYC2 334 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 ZNF833PQ6ZTB9 187 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
DDX54-204ENST00000546898 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 FAM110DQ8TAY7 271 aaPredicted RBP12.61□□□□□ -0.39
DDX54-204ENST00000546898 EDARADDQ8WWZ3 215 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 CITED2Q99967 270 aaPredicted RBP12.61□□□□□ -0.39
DDX54-204ENST00000546898 PIPOXQ9P0Z9 390 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 SLC23A1Q9UHI7 598 aa12.61□□□□□ -0.39
DDX54-204ENST00000546898 SAA2-SAA4A0A096LPE2 208 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 NCBP2LA6PVI3 153 aaKnown RBP12.6□□□□□ -0.39
DDX54-204ENST00000546898 SERPINE3A8MV23 424 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 PLXNB1O43157 2135 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 HSPA12AO43301 675 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 OPN1MWP04001 364 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 SAA2P0DJI9 122 aaPredicted RBP12.6□□□□□ -0.39
DDX54-204ENST00000546898 OPN1MW2P0DN77 364 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 OPN1MW3P0DN78 364 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 SLC2A2P11168 524 aaPredicted RBP12.6□□□□□ -0.39
DDX54-204ENST00000546898 HIST1H1DP16402 221 aaKnown RBP12.6□□□□□ -0.39
DDX54-204ENST00000546898 CD36P16671 472 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 HIST2H2BDQ6DRA6 164 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 SFXN4Q6P4A7 337 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 SLC35E3Q7Z769 313 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 CHPT1Q8WUD6 406 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 S1PR3Q99500 378 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 CHCHD6Q9BRQ6 235 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 VCX3AQ9NNX9 186 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 KCNK7Q9Y2U2 307 aa12.6□□□□□ -0.39
DDX54-204ENST00000546898 A0A087WXM4 84 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 A0A0B4J203 849 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 SMIM30A4D0T7 59 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 ZNF736B4DX44 427 aaPredicted RBP12.59□□□□□ -0.39
DDX54-204ENST00000546898 TRDCB7Z8K6 153 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 RAB29O14966 203 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 ST8SIA5O15466 376 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 KCNAB3O43448 404 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 SCGNO76038 276 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 DIRAS3O95661 229 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 KIR2DS1Q14954 304 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 NSUN5P1Q3KNT7 163 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 TIMM50Q3ZCQ8 353 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 FOXRED2Q8IWF2 684 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 Q8N9W7 124 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 OR4F17Q8NGA8 305 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 OR4A4PQ8NGN8 299 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 OR4F4Q96R69 305 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 NABP2Q9BQ15 211 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms