RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 SULT1C2O00338 296 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 BET1O15155 118 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-213ENST00000546820 IER3P46695 156 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 ARPC4P59998 168 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 CT45A1Q5HYN5 189 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 SNX29P2Q8IUI4 249 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 LAX1Q8IWV1 398 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 BEST4Q8NFU0 473 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 OR5R1Q8NH85 324 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 CT45A3Q8NHU0 189 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 C17orf50Q8WW18 174 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 MAFIPQ8WZ33 124 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 SSX3Q99909 188 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 ANXA10Q9UJ72 324 aa11.15□□□□□ -0.62
PTCH1-213ENST00000546820 TRBV6-7A0A0A0MS04 114 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 CLDN34H7C241 214 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 ITGB1BP1O14713 200 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 GAPDHP04406 335 aaKnown RBP11.14□□□□□ -0.63
PTCH1-213ENST00000546820 PTHLHP12272 177 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 ZNF134P52741 427 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 GNMTQ14749 295 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 IGSF11Q5DX21 431 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 UTF1Q5T230 341 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 TOMM40LQ969M1 308 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 CABLES2Q9BTV7 478 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 OR1A1Q9P1Q5 309 aa11.14□□□□□ -0.63
PTCH1-213ENST00000546820 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 FABP12A6NFH5 140 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 A6NHS1 94 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 VGLL3A8MV65 326 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 VENTXO95231 258 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 TNFSF8P32971 234 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 OR3A3P47888 321 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 DYNLT3P51808 116 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
PTCH1-213ENST00000546820 IL18Q14116 193 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 SLC9A3R2Q15599 337 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 PYHIN1Q6K0P9 492 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 FAM53AQ6NSI3 398 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-213ENST00000546820 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 ZDHHC22Q8N966 263 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 ZNF439Q8NDP4 499 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 GPX8Q8TED1 209 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 FAM216AQ8WUB2 273 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 ZFAND2BQ8WV99 257 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 NECAP2Q9NVZ3 263 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 PIPOXQ9P0Z9 390 aa11.13□□□□□ -0.63
PTCH1-213ENST00000546820 RBM7Q9Y580 266 aaKnown RBP11.13□□□□□ -0.63
PTCH1-213ENST00000546820 IGKV1D-8A0A087WSZ0 117 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 MEIS3P1A6NDR6 274 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 DNAJC9-AS1A6NH13 148 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 RAB29O14966 203 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 SLC31A2O15432 143 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 TXNL1O43396 289 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 RBBP9O75884 186 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 IGHV4-59P01825 116 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 HERPUD1Q15011 391 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 C16orf87Q6PH81 154 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 OR5AP2Q8NGF4 316 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 GCDHQ92947 438 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-213ENST00000546820 ABHD1Q96SE0 405 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 S1PR3Q99500 378 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 C11orf54Q9H0W9 315 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-213ENST00000546820 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 TNFRSF19Q9NS68 423 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 PITPNC1Q9UKF7 332 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 SVEP1Q4LDE5 3571 aa11.12□□□□□ -0.63
PTCH1-213ENST00000546820 H3BUX3 64 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 HSD17B6O14756 317 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 LANCL1O43813 399 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 CRYBA1P05813 215 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
PTCH1-213ENST00000546820 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 NAT1P18440 290 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 ZNF137PP52743 207 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 TAS2R46P59540 309 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 ACTBP60709 375 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 UBA52P62987 128 aaKnown RBP11.11□□□□□ -0.63
PTCH1-213ENST00000546820 ACTG1P63261 375 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 ZNF816Q0VGE8 651 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-213ENST00000546820 CDK10Q15131 360 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 PLA1AQ53H76 456 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 FOXB2Q5VYV0 432 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 TGIF2LXQ8IUE1 241 aa11.11□□□□□ -0.63
PTCH1-213ENST00000546820 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms