RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SRRM5B3KS81 715 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 J3QW42 95 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 SERPINE2P07093 398 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 PAX6P26367 422 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 FGL1Q08830 312 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.81
CCDC38-202ENST00000546386 Q3ZCU0 254 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 FIP1L1Q6UN15 594 aaKnown RBP9.96□□□□□ -0.81
CCDC38-202ENST00000546386 OR4A4PQ8NGN8 299 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 PIK3IP1Q96FE7 263 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 GSX2Q9BZM3 304 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 TMEM222Q9H0R3 208 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 ZDHHC8Q9ULC8 765 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 I3L521 148 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 WRBO00258 174 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 AGPAT2O15120 278 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 G6PCP35575 357 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 RAB14P61106 215 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF767PQ75MW2 155 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 DMRTC2Q8IXT2 367 aaPredicted RBP9.96□□□□□ -0.82
CCDC38-202ENST00000546386 SELENOHQ8IZQ5 122 aaKnown RBP9.96□□□□□ -0.82
CCDC38-202ENST00000546386 VKORC1Q9BQB6 163 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 NMES1Q9C002 83 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 SAP30LQ9HAJ7 183 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 DYNLRB1Q9NP97 96 aa9.96□□□□□ -0.82
CCDC38-202ENST00000546386 IGLV3-9A0A075B6K5 115 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 SHISA9B4DS77 424 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF737O75373 536 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 C1QL1O75973 258 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 IGKV1-39P01597 117 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 IGKV1D-39P04432 117 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 IAPPP10997 89 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 PTAFRP25105 342 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 CASP6P55212 293 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 H1FXQ92522 213 aaKnown RBP9.95□□□□□ -0.82
CCDC38-202ENST00000546386 CISD1Q9NZ45 108 aaKnown RBP9.95□□□□□ -0.82
CCDC38-202ENST00000546386 GLS2Q9UI32 602 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 PCDHB10Q9UN67 800 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 RCL1Q9Y2P8 373 aaKnown RBP9.95□□□□□ -0.82
CCDC38-202ENST00000546386 TUBAL3A6NHL2 446 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 LINC00473A8K010 186 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 K7EPK0 472 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 FCN3O75636 299 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 CLDN14O95500 239 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 TMEM50AO95807 157 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 NMBP08949 121 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 HLA-GP17693 338 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 F2RP25116 425 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
CCDC38-202ENST00000546386 FHITP49789 147 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 TMEM33P57088 247 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 LPCAT3Q6P1A2 487 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 LGI3Q8N145 548 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 KCNRGQ8N5I3 272 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 FAM71E2Q8N5Q1 922 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 NINJ1Q92982 152 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 C18orf12Q96KH6 178 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 TLN2Q9Y4G6 2542 aa9.95□□□□□ -0.82
CCDC38-202ENST00000546386 C17orf98A8MV24 154 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 GLAP06280 429 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 HKR1P10072 659 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 CCL3L1P16619 93 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 GNLYP22749 145 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 CA7P43166 264 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 AVPI1Q5T686 147 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 HSD17B11Q8NBQ5 300 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 JKAMPQ9P055 326 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 ODAMA1E959 279 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 C17orf100A8MU93 164 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 RBMXL2O75526 392 aaKnown RBP9.94□□□□□ -0.82
CCDC38-202ENST00000546386 IL15RAQ13261 267 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 CCDC71LQ8N9Z2 235 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 SH3BGRL3Q9H299 93 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 PIGMQ9H3S5 423 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 TMEM231Q9H6L2 316 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 MBNL3Q9NUK0 354 aaKnown RBP9.94□□□□□ -0.82
CCDC38-202ENST00000546386 RNF7Q9UBF6 113 aa9.94□□□□□ -0.82
CCDC38-202ENST00000546386 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
CCDC38-202ENST00000546386 BCL2L11O43521 198 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 NDUFS7O75251 213 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 REG1BP48304 166 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 UCNP55089 124 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF585BQ52M93 769 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 ZNF880Q6PDB4 577 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 KDF1Q8NAX2 398 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-202ENST00000546386 TCTEX1D2Q8WW35 142 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 GALNT14Q96FL9 552 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 TLNRD1Q9H1K6 362 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 CACNG5Q9UF02 275 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 FBXL17Q9UF56 701 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 CHST1O43916 411 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 PROP1O75360 226 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 DEDDO75618 318 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 OPN1MWP04001 364 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 HOXD4P09016 255 aaPredicted RBP9.93□□□□□ -0.82
CCDC38-202ENST00000546386 OPN1MW2P0DN77 364 aa9.93□□□□□ -0.82
CCDC38-202ENST00000546386 OPN1MW3P0DN78 364 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms