RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LINC00574Q9H8X3 128 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TAF9BQ9HBM6 251 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 RAB9BQ9NP90 201 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 EXTL2Q9UBQ6 330 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ELF5Q9UKW6 265 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 MGAT4AQ9UM21 535 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 SESN1Q9Y6P5 492 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 IGHV2-26A0A0B4J1V2 119 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV1-69DA0A0B4J2H0 117 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ODF3BA8MYP8 253 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 NPIPB11E5RHQ5 1161 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 F2RL2O00254 374 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 SDCBPO00560 298 aaPredicted RBP5.15□□□□□ -1.59
PRKDC-211ENST00000546304 CTDSP2O14595 271 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ORC5O43913 435 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 SSX5O60225 188 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV1-69P01742 117 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 HBZP02008 142 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 CGB3P0DN86 165 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 CGB7P0DN87 165 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 GZMHP20718 246 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 NFYBP25208 207 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 SAA4P35542 130 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 KIR2DS4P43632 304 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 PITPNAQ00169 270 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 SCGB2A2Q13296 93 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 MADCAM1Q13477 382 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 KIR2DS1Q14954 304 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 LTC4SQ16873 150 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 CDNFQ49AH0 187 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 RUSC1-AS1Q66K80 236 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 HCP5Q6MZN7 132 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF880Q6PDB4 577 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 BAIAP2L2Q6UXY1 529 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 BRD3OSQ6XYD6 125 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 PDZD9Q8IXQ8 264 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 OR13D1Q8NGV5 346 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 OR1L1Q8NH94 360 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 RFESDQ8TAC1 157 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 MAFIPQ8WZ33 124 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ARL11Q969Q4 196 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 SUCNR1Q9BXA5 334 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 CLEC7AQ9BXN2 247 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 BEX2Q9BXY8 128 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 TMEM133Q9H2Q1 129 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 AUNIPQ9H7T9 357 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ZMAT4Q9H898 229 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF286AQ9HBT8 521 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 Q9N2K0 584 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 BATF3Q9NR55 127 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 IDI2-AS1Q9NZ38 188 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 KCNIP1Q9NZI2 227 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 GNG12Q9UBI6 72 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 JPT1Q9UK76 154 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 NUP50Q9UKX7 468 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 A3GALT2U3KPV4 340 aa5.15□□□□□ -1.59
PRKDC-211ENST00000546304 A0A087X0M5 115 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 A0A0A6YYJ9 748 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV3-43A0A0B4J1X8 118 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 CENPVL3A0A0U1RRI6 287 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1B0GX30 115 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 NPFFO15130 113 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 FABP7O15540 132 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 CRLF1O75462 422 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 LPLP06858 475 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 MELTFP08582 738 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 FAM157CP0CG43 387 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV3-43DP0DP04 118 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 PTHLHP12272 177 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 CD34P28906 385 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 CBX5P45973 191 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 GNG10P50151 68 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 UBE2E1P51965 193 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 LOXL3P58215 753 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 GNMTQ14749 295 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 HERPUD1Q15011 391 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF626Q68DY1 528 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 OR52W1Q6IF63 320 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 Q6ZS49 121 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 C9orf139Q6ZV77 190 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 SNX29P2Q8IUI4 249 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 Q8N1X5 172 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 PNKDQ8N490 385 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 OR11H6Q8NGC7 330 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 OR10A7Q8NGE5 316 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 OR10V1Q8NGI7 309 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 OR52M1Q8NGK5 317 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 IL1F10Q8WWZ1 152 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 LEAP2Q969E1 77 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 DIRAS2Q96HU8 199 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 CABLES2Q9BTV7 478 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 MS4A7Q9GZW8 240 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-211ENST00000546304 MMP27Q9H306 513 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 HEXA-AS1Q9H8Q6 139 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 SCPEP1Q9HB40 452 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 IFT46Q9NQC8 304 aa5.14□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF230Q9UIE0 474 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-211ENST00000546304 MRPS7Q9Y2R9 242 aaKnown RBP5.14□□□□□ -1.59
PRKDC-211ENST00000546304 IGKV1-6A0A0C4DH72 117 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms