RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 TM2D1Q9BX74 207 aa17.85■□□□□ 0.45
CHD4-214ENST00000545942 ABRACLQ9P1F3 81 aa17.85■□□□□ 0.45
CHD4-214ENST00000545942 NKX1-2Q9UD57 310 aaPredicted RBP17.85■□□□□ 0.45
CHD4-214ENST00000545942 SLC22A1O15245 554 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 CD37P11049 281 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 VDAC1P21796 283 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 UNC119Q13432 240 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 IRF3Q14653 427 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 HMGN3Q15651 99 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 LIPKQ5VXJ0 399 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 ODF3L1Q8IXM7 274 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 RNF152Q8N8N0 203 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 OR6M1Q8NGM8 313 aa17.84■□□□□ 0.45
CHD4-214ENST00000545942 TMEM14DPA8MWL7 114 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 IGF1P05019 195 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 SLC2A2P11168 524 aaPredicted RBP17.83■□□□□ 0.44
CHD4-214ENST00000545942 CDX1P47902 265 aaPredicted RBP17.83■□□□□ 0.44
CHD4-214ENST00000545942 AQP4P55087 323 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 CFHR3Q02985 330 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 OR2AK2Q8NG84 335 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 RAX2Q96IS3 184 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 NABP2Q9BQ15 211 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 NICN1Q9BSH3 213 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 MRPL20Q9BYC9 149 aaKnown RBP17.83■□□□□ 0.44
CHD4-214ENST00000545942 KCNK15Q9H427 330 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 ZNF107Q9UII5 783 aaPredicted RBP17.83■□□□□ 0.44
CHD4-214ENST00000545942 ZNF580Q9UK33 172 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 TPRKBQ9Y3C4 175 aa17.83■□□□□ 0.44
CHD4-214ENST00000545942 WI2-2373I1.2A0A1W2PRP0 233 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 CCL24O00175 119 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 BPNT1O95861 308 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 IGHG4P01861 327 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 OR5H8P0DN80 308 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 MYF6P23409 242 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 BLVRBP30043 206 aaPredicted RBP17.82■□□□□ 0.44
CHD4-214ENST00000545942 QRFPP83859 136 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 LCNL1Q6ZST4 164 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 ZNF833PQ6ZTB9 187 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 SVOPQ8N4V2 548 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 OR8U1Q8NH10 309 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 IL1F10Q8WWZ1 152 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 TMEM203Q969S6 136 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 DUX3Q96PT4 197 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 CHMP1AQ9HD42 196 aaPredicted RBP17.82■□□□□ 0.44
CHD4-214ENST00000545942 PLEKHJ1Q9NW61 149 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 STEAP1Q9UHE8 339 aa17.82■□□□□ 0.44
CHD4-214ENST00000545942 NAPSAO96009 420 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 ACTBP60709 375 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 DEFB121Q5J5C9 76 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 NRG4Q8WWG1 115 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 ZNF251Q9BRH9 671 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 DUSP21Q9H596 190 aa17.81■□□□□ 0.44
CHD4-214ENST00000545942 SAA2-SAA4A0A096LPE2 208 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 HSMCR30P0CW71 290 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 SAA2P0DJI9 122 aaPredicted RBP17.8■□□□□ 0.44
CHD4-214ENST00000545942 OR3A3P47888 321 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 TPBGQ13641 420 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 KIR2DS1Q14954 304 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 ZNF880Q6PDB4 577 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 MOB1BQ7L9L4 216 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 KCTD7Q96MP8 289 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 CHCHD6Q9BRQ6 235 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 URM1Q9BTM9 101 aaKnown RBP17.8■□□□□ 0.44
CHD4-214ENST00000545942 IFI27L2Q9H2X8 130 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 PLGRKTQ9HBL7 147 aa17.8■□□□□ 0.44
CHD4-214ENST00000545942 RGS10O43665 173 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 ARSBP15848 533 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 PSMB8P28062 276 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 RAB25P57735 213 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 TRAM1Q15629 374 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 DEFB136Q30KP8 78 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 FAM71F2Q6NXP2 309 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 TMEM91Q6ZNR0 172 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 SETD6Q8TBK2 473 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 RITA1Q96K30 269 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 LPAR5Q9H1C0 372 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 RIMS4Q9H426 269 aaPredicted RBP17.79■□□□□ 0.44
CHD4-214ENST00000545942 ISYNA1Q9NPH2 558 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 PIPOXQ9P0Z9 390 aa17.79■□□□□ 0.44
CHD4-214ENST00000545942 ZMAT5Q9UDW3 170 aaKnown RBP17.79■□□□□ 0.44
CHD4-214ENST00000545942 A0A0A6YYD4 124 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 SLC17A2O00624 439 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 NBR2O15453 112 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 ARL6IP5O75915 188 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 HLA-DRB1P01911 266 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 PSMA1P25786 263 aaKnown RBP17.78■□□□□ 0.44
CHD4-214ENST00000545942 RPS25P62851 125 aaKnown RBP17.78■□□□□ 0.44
CHD4-214ENST00000545942 P2RY14Q15391 338 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 C4orf3Q8WVX3 66 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 ANKRD60Q9BZ19 345 aa17.78■□□□□ 0.44
CHD4-214ENST00000545942 TRBV6-6A0A0A6YYG2 114 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 RAB29O14966 203 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 ST8SIA5O15466 376 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 SOCS1O15524 211 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 CNTFRP26992 372 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 MLLT11Q13015 90 aaPredicted RBP17.77■□□□□ 0.44
CHD4-214ENST00000545942 FAM89BQ8N5H3 189 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 OR5M8Q8NGP6 311 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 GFI1Q99684 422 aa17.77■□□□□ 0.44
CHD4-214ENST00000545942 OR51J1Q9H342 316 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms