RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HTR2CP28335 458 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 TEX38Q6PEX7 206 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF833PQ6ZTB9 187 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF695Q8IW36 515 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 DUX3Q96PT4 197 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 NEDD4LQ96PU5 975 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 NABP2Q9BQ15 211 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 IFI27L2Q9H2X8 130 aa16.57■□□□□ 0.24
SCARB1-210ENST00000545493 SAA2-SAA4A0A096LPE2 208 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 YPEL1O60688 119 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 NAPSAO96009 420 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 SAA2P0DJI9 122 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-210ENST00000545493 SLC2A2P11168 524 aaPredicted RBP16.56■□□□□ 0.24
SCARB1-210ENST00000545493 SRMP19623 302 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 MYCNOSP40205 109 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 OR3A3P47888 321 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 RPS25P62851 125 aaKnown RBP16.56■□□□□ 0.24
SCARB1-210ENST00000545493 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 LY6G6FQ5SQ64 297 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF880Q6PDB4 577 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 RNF152Q8N8N0 203 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 OR6M1Q8NGM8 313 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 RAX2Q96IS3 184 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 YPEL2Q96QA6 119 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 FAAP24Q9BTP7 215 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 SCN3BQ9NY72 215 aa16.56■□□□□ 0.24
SCARB1-210ENST00000545493 RRP9O43818 475 aaKnown RBP16.55■□□□□ 0.24
SCARB1-210ENST00000545493 BPNT1O95861 308 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 CNTFRP26992 372 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 SOX6P35712 828 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 FOXE3Q13461 319 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 MMDQ15546 238 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 DEFB136Q30KP8 78 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 TMEM91Q6ZNR0 172 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 KCNG3Q8TAE7 436 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 TMEM203Q969S6 136 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 LPAR5Q9H1C0 372 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 DUSP21Q9H596 190 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF580Q9UK33 172 aa16.55■□□□□ 0.24
SCARB1-210ENST00000545493 IGF1P05019 195 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 CXorf66Q5JRM2 361 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-210ENST00000545493 OR2AK2Q8NG84 335 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 RITA1Q96K30 269 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 GON7Q9BXV9 100 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 ANKRD60Q9BZ19 345 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 GPR61Q9BZJ8 451 aa16.54■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF107Q9UII5 783 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-210ENST00000545493 FOXI3A8MTJ6 420 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-210ENST00000545493 ST8SIA5O15466 376 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 RGS11O94810 467 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 IGHG4P01861 327 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 ELANEP08246 267 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 VDAC1P21796 283 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 ACTBP60709 375 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 TPBGQ13641 420 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 P2RY14Q15391 338 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 GALMQ96C23 342 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 KCTD7Q96MP8 289 aa16.53■□□□□ 0.24
SCARB1-210ENST00000545493 HDHD3Q9BSH5 251 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-210ENST00000545493 PARP12Q9H0J9 701 aaKnown RBP16.53■□□□□ 0.24
SCARB1-210ENST00000545493 RGS10O43665 173 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 PSMB8P28062 276 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 BLVRBP30043 206 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-210ENST00000545493 FAM71F2Q6NXP2 309 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 MOB1BQ7L9L4 216 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 IL1F10Q8WWZ1 152 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 DPF1Q92782 380 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 ZNF251Q9BRH9 671 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 MCRIP2Q9BUT9 160 aaKnown RBP16.52■□□□□ 0.24
SCARB1-210ENST00000545493 CHMP1AQ9HD42 196 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-210ENST00000545493 TPRKBQ9Y3C4 175 aa16.52■□□□□ 0.24
SCARB1-210ENST00000545493 HUWE1Q7Z6Z7 4374 aaKnown RBP16.51■□□□□ 0.23
SCARB1-210ENST00000545493 CCL24O00175 119 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 SLC17A2O00624 439 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 SOCS1O15524 211 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 HLA-DRB1P01911 266 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 HSMCR30P0CW71 290 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 CDX1P47902 265 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-210ENST00000545493 MLLT11Q13015 90 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-210ENST00000545493 OR8U1Q8NH10 309 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 SETD6Q8TBK2 473 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 MYOZ3Q8TDC0 251 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 ABRACLQ9P1F3 81 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 AK3Q9UIJ7 227 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 AK6Q9Y3D8 172 aaKnown RBP16.51■□□□□ 0.23
SCARB1-210ENST00000545493 RYR3Q15413 4870 aa16.51■□□□□ 0.23
SCARB1-210ENST00000545493 TRBV6-6A0A0A6YYG2 114 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 NBR2O15453 112 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 CRHBPP24387 322 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 MAP2K4P45985 399 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 RAB25P57735 213 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 HLA-DRB3P79483 266 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 NDPQ00604 133 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 FAM131AQ6UXB0 335 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 PLGRKTQ9HBL7 147 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 ISYNA1Q9NPH2 558 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 PLEKHJ1Q9NW61 149 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 STEAP1Q9UHE8 339 aa16.5■□□□□ 0.23
SCARB1-210ENST00000545493 LRRC42Q9Y546 428 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms