RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ENTPD6O75354 484 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF254O75437 659 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CSN3P07498 182 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 HOXB5P09067 269 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CD7P09564 240 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CGB3P0DN86 165 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CGB7P0DN87 165 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CLUP10909 449 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 BLVRBP30043 206 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 HTR1FP30939 366 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 KCNJ3P48549 501 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 RBP2P50120 134 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ATP1B3P54709 279 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ACTR3P61158 418 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 EWSR1Q01844 656 aaKnown RBP eCLIP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ATXN7L3Q14CW9 347 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 MAPRE2Q15555 327 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 GUCA2BQ16661 112 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ANKRD55Q3KP44 614 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 AKIRIN2Q53H80 203 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ACTBL2Q562R1 376 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 LINC01590Q5TEZ4 76 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 MORN5Q5VZ52 161 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CD200R1LQ6Q8B3 271 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 IL34Q6ZMJ4 242 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ARPINQ7Z6K5 226 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 C17orf53Q8N3J3 647 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM116Q8NCL8 245 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 CCDC54Q8NEL0 328 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 OR2T33Q8NG76 320 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 PRSS3P2Q8NHM4 247 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 MPLKIPQ8TAP9 179 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 DYNLRB2Q8TF09 96 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 ZBTB9Q96C00 473 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 C10orf35Q96D05 121 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 COQ2Q96H96 371 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 TEAD3Q99594 435 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 COMMD4Q9H0A8 199 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 EGLN3Q9H6Z9 239 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 SCRT2Q9NQ03 307 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 RBFOX1Q9NWB1 397 aaKnown RBP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 FAM118AQ9NWS6 357 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 IL20Q9NYY1 176 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 IL36RNQ9UBH0 155 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 LAMP5Q9UJQ1 280 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 SAMD4AQ9UPU9 718 aaKnown RBP3.04□□□□□ -1.92
SNHG1-220ENST00000544550 GSTK1Q9Y2Q3 226 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 V9GYS6 101 aa3.04□□□□□ -1.92
SNHG1-220ENST00000544550 A0A0B4J203 849 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 IZUMO1RA6ND01 250 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 C16orf90A8MZG2 172 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 LOC110117498-PIK3R3F6TDL0 507 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 FXYD1O00168 92 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 SLC33A1O00400 549 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 NDUFAB1O14561 156 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 MRASO14807 208 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 DEGS1O15121 323 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 MITFO75030 526 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TTRP02766 147 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TRGV3P03979 118 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 FGF2P09038 288 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 GZMHP20718 246 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 BCL3P20749 454 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 AADACP22760 399 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 KIR2DS2P43631 304 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 MAP2K4P45985 399 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 RASSF2P50749 326 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF137PP52743 207 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 RIDAP52758 137 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 SNU13P55769 128 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 NANOS3P60323 173 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ACTBP60709 375 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 PAX5Q02548 391 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 SCN1BQ07699 218 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 LTC4SQ16873 150 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 C5orf64Q2M2E5 130 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 RPEL1Q2QD12 228 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 LGALS9BQ3B8N2 356 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TNFAIP8L3Q5GJ75 292 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 UTF1Q5T230 341 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 METTL21CQ5VZV1 264 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 C16orf54Q6UWD8 224 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 Q6ZSR3 168 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 SLC25A48Q6ZT89 311 aaKnown RBP3.03□□□□□ -1.92
SNHG1-220ENST00000544550 RASSF6Q6ZTQ3 369 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 NR2C2APQ86WQ0 139 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ZNF679Q8IYX0 411 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ELMOD2Q8IZ81 293 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TEX45Q8NA69 505 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 OR51T1Q8NGJ9 327 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 OR52M1Q8NGK5 317 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 OR13A1Q8NGR1 328 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 C11orf45Q8TAV5 145 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 TMEM163Q8TC26 289 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 ASB17Q8WXJ9 295 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 FAM162AQ96A26 154 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 OTULINQ96BN8 352 aa3.03□□□□□ -1.92
SNHG1-220ENST00000544550 MS4A10Q96PG2 267 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms