RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RAB5AP20339 215 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 GAMTQ14353 236 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 GFI1BQ5VTD9 330 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 C9orf106Q8NAJ2 232 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 TMPRSS5Q9H3S3 457 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 METTL1Q9UBP6 276 aaKnown RBP13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF391Q9UJN7 358 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 MRPS18CQ9Y3D5 142 aaKnown RBP13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 CHD8Q9HCK8 2581 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 SERPINE2P07093 398 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF883P0CG24 379 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 TNFSF10P50591 281 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 EDDM3AQ14507 147 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 TMEM252Q8N6L7 170 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 OR1L1Q8NH94 360 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 PUS1Q9Y606 427 aaKnown RBP eCLIP13.36□□□□□ -0.273e-6■■□□□ 11.9
SNRNP70-203ENST00000544278 ATP23Q9Y6H3 246 aa13.36□□□□□ -0.27
SNRNP70-203ENST00000544278 SOX15O60248 233 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 GPR137BO60478 399 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 RNPS1Q15287 305 aaKnown RBP13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 ODF3L1Q8IXM7 274 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 GPR146Q96CH1 333 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 MISP3Q96FF7 219 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 CACNG5Q9UF02 275 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 ASH1LQ9NR48 2969 aaKnown RBP13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 NCOR2Q9Y618 2525 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 BTBD17A6NE02 478 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 SMPD2O60906 423 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 DEFA4P12838 97 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF816Q0VGE8 651 aaPredicted RBP13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 GUK1Q16774 197 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 TBC1D28Q2M2D7 210 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 FAM201AQ5SY85 155 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 OR52L2PQ8NGH6 319 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 RSG1Q9BU20 258 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 OR51I2Q9H344 312 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 C19orf12Q9NSK7 152 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 WASF3Q9UPY6 502 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 CSMD1Q96PZ7 3565 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 BORCS7-ASMTA0A0B4J1R7 106 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 CEACAM6P40199 344 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 OR3A1P47881 315 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 BEND4Q6ZU67 534 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF573Q86YE8 665 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 UBAC2Q8NBM4 344 aa13.35□□□□□ -0.27
SNRNP70-203ENST00000544278 SPTBN1Q01082 2364 aaKnown RBP13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 MT-ND4LP03901 98 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 COL8A2P25067 703 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 ECI1P42126 302 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 NUBP1P53384 320 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 EIF5AL1Q6IS14 154 aaKnown RBP13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 CMTM1Q8IZ96 169 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 MRGPRDQ8TDS7 321 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 SH3BGRL2Q9UJC5 107 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 POMT1Q9Y6A1 747 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 TNCP24821 2201 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 FGF8P55075 233 aaPredicted RBP13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 PLEKHA2Q9HB19 425 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 TAAR3PQ9P1P4 343 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 SVEP1Q4LDE5 3571 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 ZNF318Q5VUA4 2279 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 A0A087X0M5 115 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 A0A1B0GX30 115 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 KRASP01116 189 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 IGKV1-39P01597 117 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 IGKV1D-39P04432 117 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 AGAP20933 346 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 PMELP40967 661 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 Q6ZR03 302 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 C15orf54Q8N8G6 183 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 GFOD1Q9NXC2 390 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 TMED3Q9Y3Q3 217 aa13.34□□□□□ -0.27
SNRNP70-203ENST00000544278 A6NJY4 79 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 SNRPCP09234 159 aaKnown RBP13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 P2RY1P47900 373 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 OR8G1Q15617 311 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 VSIRQ9H7M9 311 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 YLPM1P49750 1951 aaKnown RBP13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 TAAR5O14804 337 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 MLNRO43193 412 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 RAMP3O60896 148 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 SSTR5P35346 364 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 GABRA2P47869 451 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 LRP11Q86VZ4 500 aa13.33□□□□□ -0.28
SNRNP70-203ENST00000544278 THNSL2Q86YJ6 484 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms