RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.67
SMG8-202ENST00000543872 ZNF468Q5VIY5 522 aaPredicted RBP10.83□□□□□ -0.67
SMG8-202ENST00000543872 UNQ5815/PRO19632Q6UWF5 114 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 Q6ZN92 141 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 ZNF295-AS1Q8N0V1 137 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 OR5AU1Q8NGC0 362 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 RNF2Q99496 336 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 PXMP4Q9Y6I8 212 aa10.83□□□□□ -0.67
SMG8-202ENST00000543872 SYNGR2O43760 224 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 PSG2P11465 335 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 MSR1P21757 451 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 UCP1P25874 307 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 MSMO1Q15800 293 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 TEX43Q6ZNM6 134 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 HAPLN4Q86UW8 402 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 ORAOV1Q8WV07 137 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 RAB40CQ96S21 281 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 CACNA1DQ01668 2161 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 IGHV3-15A0A0B4J1V0 119 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 NPIPB13A6NJU9 1138 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 NPIPB4C9JG80 1138 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 F2Z2F3 143 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 TYMSP04818 313 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 CRISP2P16562 243 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 HINT1P49773 126 aaPredicted RBP10.83□□□□□ -0.68
SMG8-202ENST00000543872 HBG1P69891 147 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 HBG2P69892 147 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 SERF2P84101 59 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 LRRC75BQ2VPJ9 315 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 ERASQ7Z444 233 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 NEIL1Q96FI4 390 aaPredicted RBP10.83□□□□□ -0.68
SMG8-202ENST00000543872 HIPK2Q9H2X6 1198 aa10.83□□□□□ -0.68
SMG8-202ENST00000543872 TMEM250H0YL14 139 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 NRASP01111 189 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 SPINK2P20155 84 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMG8-202ENST00000543872 PINX1Q96BK5 328 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 ABHD14BQ96IU4 210 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 PCDH15Q96QU1 1955 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 PGLYRP1O75594 196 aaPredicted RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 THBS3P49746 956 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 RPL19P84098 196 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 PHYHD1Q5SRE7 291 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 ACSM6Q6P461 480 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 SPSB1Q96BD6 273 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 DERL1Q9BUN8 251 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 WDR61Q9GZS3 305 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 ZNF552Q9H707 407 aaPredicted RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 GTF3C1Q12789 2109 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 A0A1W2PQF6 199 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 ARL4DP49703 201 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 CNN3Q15417 329 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 SPATA45Q537H7 98 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
SMG8-202ENST00000543872 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
SMG8-202ENST00000543872 ZNHIT1O43257 154 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 NAPSAO96009 420 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
SMG8-202ENST00000543872 SLC38A11Q08AI6 406 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 SHBQ15464 509 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 PLCXD3Q63HM9 321 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 TMEM211Q6ICI0 200 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 SPTSSAQ969W0 71 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 TMEM204Q9BSN7 226 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 WIPI2Q9Y4P8 454 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 IGKV3D-11A0A0A0MRZ8 115 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 DIRC3C9JPN6 131 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 C11orf94C9JXX5 98 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 YPEL1O60688 119 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 NDUFB4O95168 129 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 NPPCP23582 126 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 LCN2P80188 198 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 MCEMP1Q8IX19 187 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 CADM4Q8NFZ8 388 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 IL1F10Q8WWZ1 152 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 PSMF1Q92530 271 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 CORO2AQ92828 525 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 APH1AQ96BI3 265 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 OXGR1Q96P68 337 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 YPEL2Q96QA6 119 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 CLDN1O95832 211 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 SERPINA7P05543 415 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 CDC34P49427 236 aaPredicted RBP10.81□□□□□ -0.68
SMG8-202ENST00000543872 SIGLECL1Q8N7X8 197 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 UBALD1Q8TB05 177 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 ZNF501Q96CX3 271 aaPredicted RBP10.81□□□□□ -0.68
SMG8-202ENST00000543872 ZNF837Q96EG3 531 aaPredicted RBP10.81□□□□□ -0.68
SMG8-202ENST00000543872 SGCZQ96LD1 299 aa10.81□□□□□ -0.68
SMG8-202ENST00000543872 F6UZH7 168 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms