RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 KLRD1Q13241 179 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 DCTN2Q13561 401 aaKnown RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 FAAP20Q6NZ36 180 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 H1FOOQ8IZA3 346 aaPredicted RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 OR10X1Q8NGY0 326 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 OR56B4Q8NH76 319 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 FAM216AQ8WUB2 273 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 TNFRSF14Q92956 283 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 LEAP2Q969E1 77 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 TBX15Q96SF7 602 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 TMPRSS13Q9BYE2 586 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 UNKLQ9H9P5 680 aaKnown RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 HRASLSQ9HDD0 168 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 PALMDQ9NP74 551 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 OR2W1Q9Y3N9 320 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 FLNBO75369 2602 aaKnown RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 A0A087X0M5 115 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 A0A1B0GX30 115 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 PPYP01298 95 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 PGAM2P15259 253 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 FOSL1P15407 271 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 CD34P28906 385 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 S100GP29377 79 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 ECI1P42126 302 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 PDZD9Q8IXQ8 264 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 C11orf42Q8N5U0 333 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 OR4D10Q8NGI6 311 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 GIMAP1Q8WWP7 306 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 TOMM40LQ969M1 308 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 CREB3L1Q96BA8 519 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 UPRTQ96BW1 309 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 OR2D2Q9H210 308 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 MMP28Q9H239 520 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 ZNF221Q9UK13 617 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 PSG11Q9UQ72 335 aa9.72□□□□□ -0.85
DDB1-223ENST00000543658 NOTCH2Q04721 2471 aa9.71□□□□□ -0.85
DDB1-223ENST00000543658 A0A1W2PPE3 182 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 A8MV72 311 aaPredicted RBP9.71□□□□□ -0.86
DDB1-223ENST00000543658 J3QR06 171 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 ITGB1BP1O14713 200 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 ST8SIA5O15466 376 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 SLC22A5O76082 557 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 AADACP22760 399 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 CEACAM3P40198 252 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 GPR12P47775 334 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 UBE2E1P51965 193 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 DLX1P56177 255 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 PRB3Q04118 309 aaPredicted RBP9.71□□□□□ -0.86
DDB1-223ENST00000543658 ASAH1Q13510 395 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 HLA-DRB5Q30154 266 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 LY6G6FQ5SQ64 297 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 LPCAT3Q6P1A2 487 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 LYG1Q8N1E2 194 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 C8orf31Q8N9H6 132 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 POC5Q8NA72 575 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 OR51S1Q8NGJ8 323 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 NANPQ8TBE9 248 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 ENKURQ8TC29 256 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 SCGB3A2Q96PL1 93 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 SLC6A7Q99884 636 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 TOLLIPQ9H0E2 274 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 GHITMQ9H3K2 345 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 PIPOXQ9P0Z9 390 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 VPS13CQ709C8 3753 aa9.71□□□□□ -0.86
DDB1-223ENST00000543658 FLNAP21333 2647 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 RAB29O14966 203 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 TUSC2O75896 110 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 OR8U9P0C7N5 309 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 HTR1DP28221 377 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 SRP14P37108 136 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 ARHGDIBP52566 201 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 RBMS2Q15434 407 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 ABCA11PQ4W5N1 156 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 DHRS11Q6UWP2 260 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 CLEC9AQ6UXN8 241 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 IDO2Q6ZQW0 420 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 SLC25A48Q6ZT89 311 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 LINC00311Q8N616 119 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 BEND2Q8NDZ0 799 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 OR11H6Q8NGC7 330 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 OR8U1Q8NH10 309 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 TERB2Q8NHR7 220 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 MOB3AQ96BX8 217 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 S1PR3Q99500 378 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 C11orf54Q9H0W9 315 aaPredicted RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 DPAGT1Q9H3H5 408 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 SLC2A8Q9NY64 477 aa9.7□□□□□ -0.86
DDB1-223ENST00000543658 C14orf166Q9Y224 244 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 TBL2Q9Y4P3 447 aaKnown RBP9.7□□□□□ -0.86
DDB1-223ENST00000543658 CSMD1Q96PZ7 3565 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms