RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 Q6P435 159 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 TMEM183AQ8IXX5 376 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 DVL1O14640 695 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 KBTBD11O94819 623 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 MBP02144 154 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 CCNOP22674 350 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 GPX4P36969 197 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-208ENST00000543633 SSTP61278 116 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 ARL16Q0P5N6 197 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 SSPNQ14714 243 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 TESK1Q15569 626 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 MSMO1Q15800 293 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 NCR3LG1Q68D85 454 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 TMEM14EPQ6UXP3 125 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 RDH5Q92781 318 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 VSIRQ9H7M9 311 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-208ENST00000543633 MANBALQ9NQG1 85 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 PINLYPA6NC86 204 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 TSTD3H0UI37 97 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-208ENST00000543633 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 IAPPP10997 89 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 PAX1P15863 534 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 OTX2P32243 289 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 CLDN18P56856 261 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
VPS33A-208ENST00000543633 SLC38A11Q08AI6 406 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF497Q6ZNH5 498 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 PRRG4Q9BZD6 226 aa11.63□□□□□ -0.55
VPS33A-208ENST00000543633 MBNL3Q9NUK0 354 aaKnown RBP11.63□□□□□ -0.55
VPS33A-208ENST00000543633 CTXND1A0A1B0GTU2 59 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF737O75373 536 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
VPS33A-208ENST00000543633 LPAL2Q16609 132 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 TMEM241Q24JQ0 296 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 REC114Q7Z4M0 266 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 PACRGQ96M98 296 aaPredicted RBP11.62□□□□□ -0.55
VPS33A-208ENST00000543633 OR4C12Q96R67 309 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 SMIM7Q9BQ49 75 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 SLC39A9Q9NUM3 307 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 OR1A1Q9P1Q5 309 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 A0A096LPE4 126 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 A0A1W2PPZ6 126 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 HS3ST1O14792 307 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 FABP4P15090 132 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 DBX2Q6ZNG2 339 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 OR2M7Q8NG81 312 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 LHX4Q969G2 390 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 S100PBPQ96BU1 408 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 HIST1H2BLQ99880 126 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 RTL8AQ9BWD3 113 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 RBKSQ9H477 322 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 UFSP2Q9NUQ7 469 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 POLDIP2Q9Y2S7 368 aa11.62□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF503-AS2A6NEH8 195 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 CER1O95813 267 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 NGFP01138 241 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 PSMB3P49720 205 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 TUSC5Q8IXB3 177 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 TCTEX1D1Q8N7M0 179 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 NANOS1Q8WY41 292 aaKnown RBP11.61□□□□□ -0.55
VPS33A-208ENST00000543633 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 TMEM147Q9BVK8 224 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 SMOC1Q9H4F8 434 aa11.61□□□□□ -0.55
VPS33A-208ENST00000543633 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
VPS33A-208ENST00000543633 MKRN2OSH3BPM6 223 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 CCL2P13500 99 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 GAMTQ14353 236 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 DCAF12Q5T6F0 453 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 OR4X1Q8NH49 305 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 IL1F10Q8WWZ1 152 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 C14orf144Q96I85 54 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 OR5B12Q96R08 314 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 ZPBPQ9BS86 351 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 MRPL37Q9BZE1 423 aaKnown RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms