RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RAB7AP51149 207 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 LOXL3P58215 753 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 HILS1P60008 231 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 SRSF2Q01130 221 aaKnown RBP5.12□□□□□ -1.59
LTBR-212ENST00000543542 HES1Q14469 280 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 LY6EQ16553 131 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 SRSF7Q16629 238 aaKnown RBP eCLIP5.12□□□□□ -1.59
LTBR-212ENST00000543542 LRRC75BQ2VPJ9 315 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 Q3ZCU0 254 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 IGSF11Q5DX21 431 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 UTF1Q5T230 341 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 TPTE2P1Q5T6R2 138 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 PYHIN1Q6K0P9 492 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 Q6YL49 198 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 Q6ZPA2 131 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 HOGA1Q86XE5 327 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 TGIF2LXQ8IUE1 241 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 OR5H2Q8NGV7 314 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 C17orf50Q8WW18 174 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 SSMEM1Q8WWF3 244 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 CAPSLQ8WWF8 208 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 FCAMRQ8WWV6 532 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 S1PR3Q99500 378 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 MIXL1Q9H2W2 232 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 SCPEP1Q9HB40 452 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 NECAP2Q9NVZ3 263 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 RDH8Q9NYR8 311 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 RABL2AQ9UBK7 228 aaPredicted RBP5.12□□□□□ -1.59
LTBR-212ENST00000543542 ZNF221Q9UK13 617 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 RABL2BQ9UNT1 228 aa5.12□□□□□ -1.59
LTBR-212ENST00000543542 IGKV1D-8A0A087WSZ0 117 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 TRBV6-7A0A0A0MS04 114 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 OOSP1A8MZH6 123 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 SULT1C2O00338 296 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 RAB29O14966 203 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 TXNL1O43396 289 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 VENTXO95231 258 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 DIRAS3O95661 229 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 HLA-DQB1P01920 261 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 PMP2P02689 132 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 IFNA6P05013 189 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 OR8U9P0C7N5 309 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 NFYAP23511 347 aaPredicted RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 HLA-DMAP28067 261 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 TNFSF8P32971 234 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 RCVRNP35243 200 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 IER3P46695 156 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 GPR12P47775 334 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 RAB13P51153 203 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ZNF134P52741 427 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 TAS2R46P59540 309 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ACTBP60709 375 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 HERV-K104P61576 105 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 TSPAN5P62079 268 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ACTG1P63261 375 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 MRPS10P82664 201 aaKnown RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 CDK10Q15131 360 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 SLC9A3R2Q15599 337 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 PYDC2Q56P42 97 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ARSJQ5FYB0 599 aaPredicted RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 CT45A1Q5HYN5 189 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 SPANXN2Q5MJ10 180 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 Q6ZS49 121 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 SLC25A48Q6ZT89 311 aaKnown RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 DYNAPQ8N1N2 210 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 LINC00311Q8N616 119 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 C8orf31Q8N9H6 132 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ZNF439Q8NDP4 499 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 OR5AP2Q8NGF4 316 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 OR8U1Q8NH10 309 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 OR5R1Q8NH85 324 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 CT45A3Q8NHU0 189 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 ABHD14BQ96IU4 210 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 CABLES2Q9BTV7 478 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 NXF2Q9GZY0 626 aaKnown RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 C11orf54Q9H0W9 315 aaPredicted RBP5.11□□□□□ -1.59
LTBR-212ENST00000543542 MEGF9Q9H1U4 602 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 EHFQ9NZC4 300 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 PIPOXQ9P0Z9 390 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 PITPNC1Q9UKF7 332 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 RNF150Q9ULK6 438 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 POMT1Q9Y6A1 747 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 CSPG4Q6UVK1 2322 aa5.11□□□□□ -1.59
LTBR-212ENST00000543542 NIPBLQ6KC79 2804 aaeCLIP5.1□□□□□ -1.59
LTBR-212ENST00000543542 SAA2-SAA4A0A096LPE2 208 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 IGHV3-72A0A0B4J1Y9 119 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 IGHV1-3A0A0C4DH29 117 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 IGKV1-6A0A0C4DH72 117 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 A6NHS1 94 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 ZNF736B4DX44 427 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 GABARAPH6UMI1 98 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 TIMM23O14925 209 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 TPPPO94811 219 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 FAM106CPP0CH98 169 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 SAA2P0DJI9 122 aaPredicted RBP5.1□□□□□ -1.59
LTBR-212ENST00000543542 OR5H8P0DN80 308 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 CD24P25063 80 aa5.1□□□□□ -1.59
LTBR-212ENST00000543542 FCGR2CP31995 323 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms