RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 FAM71F2Q6NXP2 309 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 TMEM65Q6PI78 240 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 LCNL1Q6ZST4 164 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 HSPB9Q9BQS6 159 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 FKBP14Q9NWM8 211 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 KIAA1456Q9P272 454 aa10.29□□□□□ -0.76
RTN3-212ENST00000543123 NBR2O15453 112 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 HLA-DRB1P01911 266 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 CDK1P06493 297 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 SLC2A2P11168 524 aaPredicted RBP10.28□□□□□ -0.76
RTN3-212ENST00000543123 PSMB8P28062 276 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 CHATP28329 748 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 VHLP40337 213 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 F2RL1P55085 397 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 ACTBP60709 375 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
RTN3-212ENST00000543123 GNMTQ14749 295 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 HSD17B12Q53GQ0 312 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 LAIR2Q6ISS4 152 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 ZNF833PQ6ZTB9 187 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 DUX3Q96PT4 197 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 TMED9Q9BVK6 235 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 GHITMQ9H3K2 345 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 RIMS4Q9H426 269 aaPredicted RBP10.28□□□□□ -0.76
RTN3-212ENST00000543123 CHMP1AQ9HD42 196 aaPredicted RBP10.28□□□□□ -0.76
RTN3-212ENST00000543123 SCN3BQ9NY72 215 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 PIPOXQ9P0Z9 390 aa10.28□□□□□ -0.76
RTN3-212ENST00000543123 BPNT1O95861 308 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 HTR2CP28335 458 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 SPHARQ15513 63 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 HMGN3Q15651 99 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 OR6M1Q8NGM8 313 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 UFD1Q92890 307 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 UBE2E2Q96LR5 201 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 NABP2Q9BQ15 211 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 SULT4A1Q9BR01 284 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 MRPL20Q9BYC9 149 aaKnown RBP10.27□□□□□ -0.77
RTN3-212ENST00000543123 PARP11Q9NR21 331 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 MGAT4AQ9UM21 535 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 TENM3Q9P273 2699 aa10.27□□□□□ -0.77
RTN3-212ENST00000543123 SAA2-SAA4A0A096LPE2 208 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 SEC14L6B5MCN3 397 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 PTGES3LE9PB15 166 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 RAB29O14966 203 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 SLC22A1O15245 554 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 SAA2P0DJI9 122 aaPredicted RBP10.26□□□□□ -0.77
RTN3-212ENST00000543123 SRMP19623 302 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 FHL3Q13643 280 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 MED22Q15528 200 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 TRAM1Q15629 374 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 C5orf64Q2M2E5 130 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 C6orf201Q7Z4U5 140 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 CEACAM19Q7Z692 300 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 LRRTM1Q86UE6 522 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 ODF3L1Q8IXM7 274 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 SVOPQ8N4V2 548 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 URM1Q9BTM9 101 aaKnown RBP10.26□□□□□ -0.77
RTN3-212ENST00000543123 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 OR51J1Q9H342 316 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 VSIG4Q9Y279 399 aa10.26□□□□□ -0.77
RTN3-212ENST00000543123 TRAV41A0A0B4J266 112 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 OR5H14A6NHG9 310 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 ARL6IP5O75915 188 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 NAPSAO96009 420 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 UCHL1P09936 223 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
RTN3-212ENST00000543123 PSMA1P25786 263 aaKnown RBP10.25□□□□□ -0.77
RTN3-212ENST00000543123 BLVRBP30043 206 aaPredicted RBP10.25□□□□□ -0.77
RTN3-212ENST00000543123 MC5RP33032 325 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 OR3A3P47888 321 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 INSL3P51460 131 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 LUMP51884 338 aaPredicted RBP10.25□□□□□ -0.77
RTN3-212ENST00000543123 RUNX1Q01196 453 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 INSL4Q14641 139 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 PLGLAQ15195 96 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 FAM27D1Q5T7N8 215 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 OR10K2Q6IF99 312 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 LIN54Q6MZP7 749 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 TCTEX1D1Q8N7M0 179 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 NPBQ8NG41 125 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 SETD6Q8TBK2 473 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 EDARADDQ8WWZ3 215 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 ANKRD60Q9BZ19 345 aa10.25□□□□□ -0.77
RTN3-212ENST00000543123 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms