RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 GNMTQ14749 295 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 P2RY14Q15391 338 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 REC114Q7Z4M0 266 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 ZNF329Q86UD4 541 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 SVOPQ8N4V2 548 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 FAM89BQ8N5H3 189 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 NOL4LQ96MY1 436 aaPredicted RBP13.8□□□□□ -0.2
LTBR-210ENST00000542830 GFI1Q99684 422 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 RASL11BQ9BPW5 248 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 GON7Q9BXV9 100 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 PLSCR3Q9NRY6 295 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 STEAP1Q9UHE8 339 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 HSF4Q9ULV5 492 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 MGAT4AQ9UM21 535 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 V9GY05 133 aa13.8□□□□□ -0.2
LTBR-210ENST00000542830 PRKDCP78527 4128 aaKnown RBP13.79□□□□□ -0.2
LTBR-210ENST00000542830 A0A0A6YYD4 124 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 TRBV6-6A0A0A6YYG2 114 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 ZNF736B4DX44 427 aaPredicted RBP13.79□□□□□ -0.2
LTBR-210ENST00000542830 MRPS14O60783 128 aaKnown RBP13.79□□□□□ -0.2
LTBR-210ENST00000542830 SLC6A1P30531 599 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 GPR12P47775 334 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 LSAMPQ13449 338 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 ZNF880Q6PDB4 577 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 STPG2Q8N412 459 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 OR2AK2Q8NG84 335 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 OR51D1Q8NGF3 324 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 S1PR3Q99500 378 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 ZFP57Q9NU63 452 aa13.79□□□□□ -0.2
LTBR-210ENST00000542830 PDCD5O14737 125 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 SOCS1O15524 211 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 RRP9O43818 475 aaKnown RBP13.78□□□□□ -0.2
LTBR-210ENST00000542830 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 RPL23AP62750 156 aaKnown RBP13.78□□□□□ -0.2
LTBR-210ENST00000542830 FAM71F2Q6NXP2 309 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 ODF3L1Q8IXM7 274 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 SETD6Q8TBK2 473 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 IL1F10Q8WWZ1 152 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 FAM3DQ96BQ1 224 aa13.78□□□□□ -0.2
LTBR-210ENST00000542830 TEX38Q6PEX7 206 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 C5orf24Q7Z6I8 188 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 FAM71E2Q8N5Q1 922 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 OR56B1Q8NGI3 324 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 Q9H521 79 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 C12orf4Q9NQ89 552 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 PIPOXQ9P0Z9 390 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 AK3Q9UIJ7 227 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
LTBR-210ENST00000542830 SAA2-SAA4A0A096LPE2 208 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 TRAV1-2A0A0B4J238 106 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
LTBR-210ENST00000542830 ITGB1BP1O14713 200 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 DUS4LO95620 317 aaKnown RBP13.76□□□□□ -0.21
LTBR-210ENST00000542830 SAA2P0DJI9 122 aaPredicted RBP13.76□□□□□ -0.21
LTBR-210ENST00000542830 GALP22466 123 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 MYL9P24844 172 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 SOX6P35712 828 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 VEGFCP49767 419 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 F2RL1P55085 397 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 CLDN12P56749 244 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 SSX1Q16384 188 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 C2orf76Q3KRA6 126 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 PHF21AQ96BD5 680 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 RCC1LQ96I51 464 aaKnown RBP13.76□□□□□ -0.21
LTBR-210ENST00000542830 NABP2Q9BQ15 211 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
LTBR-210ENST00000542830 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 NECAP2Q9NVZ3 263 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 RAB22AQ9UL26 194 aa13.76□□□□□ -0.21
LTBR-210ENST00000542830 LINC01548A6NM66 108 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 RAB29O14966 203 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 DENRO43583 198 aaKnown RBP13.75□□□□□ -0.21
LTBR-210ENST00000542830 TMEM50BP56557 158 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 HLA-DRB3P79483 266 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 MMDQ15546 238 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 PNLIPRP3Q17RR3 467 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 Q6ZPA2 131 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 ARHGAP5-AS1Q96IT6 56 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 CMSS1Q9BQ75 279 aaKnown RBP13.75□□□□□ -0.21
LTBR-210ENST00000542830 IFI27L2Q9H2X8 130 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 SLC23A1Q9UHI7 598 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 ZNF580Q9UK33 172 aa13.75□□□□□ -0.21
LTBR-210ENST00000542830 TMEM272A0A1B0GTI8 110 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 TRDV1A0A1B0GX56 115 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 NUDT19A8MXV4 375 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 ST8SIA5O15466 376 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 OR5H8P0DN80 308 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 IGLL1P15814 213 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 VDAC1P21796 283 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 ZBTB25P24278 435 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 OR3A3P47888 321 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 ACTBP60709 375 aa13.74□□□□□ -0.21
LTBR-210ENST00000542830 CXorf66Q5JRM2 361 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms