RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 TPGS1Q6ZTW0 290 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 SSX6Q7RTT6 188 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 LYZL2Q7Z4W2 148 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 GALNT10Q86SR1 603 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ST13P4Q8IZP2 240 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 PDCL2Q8N4E4 241 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ATPAF2Q8N5M1 289 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 DRAXINQ8NBI3 349 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ACBD4Q8NC06 268 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF738Q8NE65 137 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 BLNKQ8WV28 456 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 NELFBQ8WX92 580 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 NAP1L5Q96NT1 182 aaPredicted RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 PITX2Q99697 317 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 METTL8Q9H825 291 aaKnown RBP1.12□□□□□ -2.23
PRKDC-210ENST00000541488 RMND1Q9NWS8 449 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 STMN3Q9NZ72 180 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 FADS3Q9Y5Q0 445 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 ICOSQ9Y6W8 199 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 CSMD2Q7Z408 3487 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 COL4A1P02462 1669 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 DUOX1Q9NRD9 1551 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 NAV3Q8IVL0 2385 aa1.12□□□□□ -2.23
PRKDC-210ENST00000541488 MYO9BQ13459 2157 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 IGF2RP11717 2491 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 RAB3GAP2Q9H2M9 1393 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 MYBPHLA2RUH7 354 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF729A6NN14 1252 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 GGTLC3B5MD39 225 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 FFAR1O14842 300 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 UBDO15205 165 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 SC5DO75845 299 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 IGHMP01871 453 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 SOD3P08294 240 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 GIMD1P0DJR0 217 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 GTF2F2P13984 249 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF708P17019 499 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 PRPS1L1P21108 318 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 RPA3P35244 121 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 FUSP35637 526 aaKnown RBP eCLIP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 RANBP1P43487 201 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF83P51522 516 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 TSPAN5P62079 268 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 C2orf80Q0P641 193 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 GUSBP1Q15486 140 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF181Q2M3W8 571 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 GOLGA7BQ2TAP0 167 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 FAM19A1Q7Z5A9 133 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 DPPA2Q7Z7J5 298 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZFP82Q8N141 532 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 SPICQ8N5J4 248 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 EIF4E3Q8N5X7 224 aaKnown RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 OR8G5Q8NG78 346 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 OR2M3Q8NG83 312 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 OR6K3Q8NGY3 331 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 CASTOR1Q8WTX7 329 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 C2orf15Q8WU43 125 aaKnown RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 CCL17Q92583 94 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 APOBEC3DQ96AK3 386 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 MSANTD3Q96H12 275 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ZNF75AQ96N20 296 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 BIRC8Q96P09 236 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 ANAPC13Q9BS18 74 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 NAGKQ9UJ70 344 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 DOPEY2Q9Y3R5 2298 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 RIC1Q4ADV7 1423 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 EP300Q09472 2414 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 MGAQ8IWI9 3026 aa1.11□□□□□ -2.23
PRKDC-210ENST00000541488 MUC22E2RYF6 1773 aaPredicted RBP1.11□□□□□ -2.23
PRKDC-210ENST00000541488 KIF24Q5T7B8 1368 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ADGRG4Q8IZF6 3080 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 RIF1Q5UIP0 2472 aaKnown RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PCNX1Q96RV3 2341 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ARAP2Q8WZ64 1704 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 RYR3Q15413 4870 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 CEP162Q5TB80 1403 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 RBFOX3A6NFN3 312 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 NDUFS8O00217 210 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PSMD11O00231 422 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ISLRO14498 428 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PSIP1O75475 530 aaKnown RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 MYO1DO94832 1006 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PDYNP01213 254 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 TRGV3P03979 118 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 S100A9P06702 114 aaKnown RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 SLC2A1P11166 492 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 CCL5P13501 91 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 IL9P15248 144 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 PSMB9P28065 219 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 GTF2H1P32780 548 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 GCLMP48507 274 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ATP5J2P56134 94 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 BAXQ07812 192 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 TMEM241Q24JQ0 296 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 C18orf21Q32NC0 220 aaPredicted RBP1.1□□□□□ -2.23
PRKDC-210ENST00000541488 KRTAP25-1Q3LHN0 102 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 ERICH5Q6P6B1 374 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 SPNS3Q6ZMD2 512 aa1.1□□□□□ -2.23
PRKDC-210ENST00000541488 RBM45Q8IUH3 476 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms