RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IGHV4-59P01825 116 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 CRYBA1P05813 215 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 EIF4EP06730 217 aaKnown RBP15.17■□□□□ 0.02
VPS33A-205ENST00000541169 SCTP09683 121 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 IGHV3-43DP0DP04 118 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 ELK1P19419 428 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 PRSS3P35030 304 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 CEACAM6P40199 344 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 TAS2R20P59543 309 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 ZNF816Q0VGE8 651 aaPredicted RBP15.17■□□□□ 0.02
VPS33A-205ENST00000541169 FAM71F2Q6NXP2 309 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 OR52L2PQ8NGH6 319 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 UBALD1Q8TB05 177 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 NUDCD2Q8WVJ2 157 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 LEAP2Q969E1 77 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 ST6GALNAC5Q9BVH7 336 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 PIPOXQ9P0Z9 390 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 ZFHX3Q15911 3703 aa15.17■□□□□ 0.02
VPS33A-205ENST00000541169 TRBV6-7A0A0A0MS04 114 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 H3BUX3 64 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 SULT1C2O00338 296 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 PPP1CCP36873 323 aaKnown RBP15.16■□□□□ 0.02
VPS33A-205ENST00000541169 CT45A1Q5HYN5 189 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 CNIH2Q6PI25 160 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 HOGA1Q86XE5 327 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 THNSL2Q86YJ6 484 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 OR10V1Q8NGI7 309 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 CT45A3Q8NHU0 189 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 C17orf50Q8WW18 174 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 GINS4Q9BRT9 223 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 ANXA10Q9UJ72 324 aa15.16■□□□□ 0.02
VPS33A-205ENST00000541169 HSD17B6O14756 317 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 RAB29O14966 203 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 LANCL1O43813 399 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 IGHV3-7P01780 117 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 FAM106CPP0CH98 169 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 LDLRAD2Q5SZI1 272 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 C16orf82Q7Z2V1 217 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 ST6GALNAC6Q969X2 333 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 AKR1E2Q96JD6 320 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 CHIAQ9BZP6 476 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 SLIRPQ9GZT3 109 aaKnown RBP15.15■□□□□ 0.02
VPS33A-205ENST00000541169 MMP27Q9H306 513 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 IFT46Q9NQC8 304 aa15.15■□□□□ 0.02
VPS33A-205ENST00000541169 ZNF230Q9UIE0 474 aaPredicted RBP15.15■□□□□ 0.02
VPS33A-205ENST00000541169 SSX5O60225 188 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 GSTT2P0CG29 244 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 GSTT2BP0CG30 244 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 ZNF134P52741 427 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 MRPS10P82664 201 aaKnown RBP15.14■□□□□ 0.01
VPS33A-205ENST00000541169 GNMTQ14749 295 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 LYG1Q8N1E2 194 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 DYNAPQ8N1N2 210 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 BEST4Q8NFU0 473 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 MCFD2Q8NI22 146 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 CYYR1Q96J86 154 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 S1PR3Q99500 378 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 NXF2Q9GZY0 626 aaKnown RBP15.14■□□□□ 0.01
VPS33A-205ENST00000541169 EXTL2Q9UBQ6 330 aa15.14■□□□□ 0.01
VPS33A-205ENST00000541169 ELF5Q9UKW6 265 aaPredicted RBP15.14■□□□□ 0.01
VPS33A-205ENST00000541169 ANK3Q12955 4377 aaKnown RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 BET1O15155 118 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 HLA-DQB1P01920 261 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 ARPC4P59998 168 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 HABP2Q14520 560 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 HERPUD1Q15011 391 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 UTF1Q5T230 341 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 TGIF2LXQ8IUE1 241 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 IZUMO1Q8IYV9 350 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 RTN4IP1Q8WWV3 396 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 GCDHQ92947 438 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 C6orf62Q9GZU0 229 aaPredicted RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 RDH8Q9NYR8 311 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 ZNF221Q9UK13 617 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 TCF19Q9Y242 345 aa15.13■□□□□ 0.01
VPS33A-205ENST00000541169 MRPS7Q9Y2R9 242 aaKnown RBP15.13■□□□□ 0.01
VPS33A-205ENST00000541169 IGKV1-6A0A0C4DH72 117 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 A0A1W2PPE3 182 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 RNF212BA8MTL3 300 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 SLC22A5O76082 557 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 TAS2R46P59540 309 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 IGSF11Q5DX21 431 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 PIFOQ8TCI5 191 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 AGMATQ9BSE5 352 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 NECAP2Q9NVZ3 263 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 GAB2Q9UQC2 676 aa15.12■□□□□ 0.01
VPS33A-205ENST00000541169 IGHV1-3A0A0C4DH29 117 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 A0A1B0GUS0 222 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 A0A1W2PPI3 338 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 FAM90A9PA6NNJ1 464 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 M0QZK8 103 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 GPR137BO60478 399 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 CD1BP29016 333 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 S100A5P33763 92 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 ACTBP60709 375 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 ACTG1P63261 375 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 FOXL1Q12952 345 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 PLA1AQ53H76 456 aa15.11■□□□□ 0.01
VPS33A-205ENST00000541169 DHRS7BQ6IAN0 325 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms