RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CST11Q9H112 138 aa9.31□□□□□ -0.92
CBX3P4-202ENST00000540428 PARP11Q9NR21 331 aa9.31□□□□□ -0.92
CBX3P4-202ENST00000540428 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
CBX3P4-202ENST00000540428 MED21Q13503 144 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 SIGIRRQ6IA17 410 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 FAM71F2Q6NXP2 309 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 LYPD6Q86Y78 171 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 SBSPONQ8IVN8 264 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 NKAIN3Q8N8D7 197 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 ZNF555Q8NEP9 628 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 OR52L2PQ8NGH6 319 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 Q96M66 194 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 MRPL20Q9BYC9 149 aaKnown RBP9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 SELENOIQ9C0D9 397 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 GHITMQ9H3K2 345 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 KIAA1456Q9P272 454 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 GHRLQ9UBU3 117 aa9.3□□□□□ -0.92
CBX3P4-202ENST00000540428 LINC01619G3V211 115 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 PDCD6O75340 191 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 SAP30O75446 220 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 CRTAPO75718 401 aaPredicted RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 MAS1P04201 325 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 GP9P14770 177 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 CNTFRP26992 372 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 BLVRBP30043 206 aaPredicted RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 PPP1CCP36873 323 aaKnown RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 CAPGP40121 348 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 TAS2R43P59537 309 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 DOC2BQ14184 412 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 GNMTQ14749 295 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 C6orf141Q5SZD1 244 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 PQLC1Q8N2U9 271 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 ZNF485Q8NCK3 441 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 THRSPQ92748 146 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 DLX4Q92988 240 aaPredicted RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 GALMQ96C23 342 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 RITA1Q96K30 269 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 OR14A2Q96R54 314 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 UQCC2Q9BRT2 126 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 TOLLIPQ9H0E2 274 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 BANF2Q9H503 90 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 SMPD3Q9NY59 655 aaPredicted RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 CLEC2DQ9UHP7 191 aa9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 FOXA2Q9Y261 457 aaPredicted RBP9.29□□□□□ -0.92
CBX3P4-202ENST00000540428 SAA2-SAA4A0A096LPE2 208 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 A0A1W2PN81 502 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 UBE2QL1A1L167 161 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 ARPC1BO15143 372 aaKnown RBP9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 CD1AP06126 327 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 LGALS1P09382 135 aaKnown RBP9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 OR8U9P0C7N5 309 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 FRMD6-AS1P0C7T7 363 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 SAA2P0DJI9 122 aaPredicted RBP9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 SPNP16150 400 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 CHRNA7P36544 502 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 GABPB1Q06547 395 aaPredicted RBP9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 HMGN3Q15651 99 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 PYHIN1Q6K0P9 492 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 ACSM6Q6P461 480 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 OR2AK2Q8NG84 335 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 DERL3Q96Q80 235 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 ZMAT4Q9H898 229 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 PIPOXQ9P0Z9 390 aa9.28□□□□□ -0.92
CBX3P4-202ENST00000540428 A0A1W2PPK0 400 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 RRHO14718 337 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 RAB29O14966 203 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 SOX15O60248 233 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 OR3A3P47888 321 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 SLURP1P55000 103 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 CX3CL1P78423 397 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 NDPQ00604 133 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 ZFP41Q8N8Y5 198 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 FLYWCH2Q96CP2 140 aaKnown RBP9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 RNF5Q99942 180 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 ABRACLQ9P1F3 81 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 STEAP1Q9UHE8 339 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 RNF150Q9ULK6 438 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 FBXO7Q9Y3I1 522 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 NUBP2Q9Y5Y2 271 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 SORL1Q92673 2214 aa9.27□□□□□ -0.93
CBX3P4-202ENST00000540428 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 A0A087WW49 117 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 OR5H14A6NHG9 310 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 ITGB1BP1O14713 200 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 RBBP9O75884 186 aa9.26□□□□□ -0.93
CBX3P4-202ENST00000540428 HSPB1P04792 205 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms