RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FAM90A14PP0C7W9 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A24PP0C7X0 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SMIM17P0DL12 118 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RPS23P62266 143 aaKnown RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 P2RY6Q15077 328 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 AMMECR1LQ6DCA0 310 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CYP2G1PQ6ZSU1 146 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 VASH2Q86V25 355 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 C9orf40Q8IXQ3 194 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 GRAMD2BQ96HH9 432 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 C20orf144Q9BQM9 153 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SSBP4Q9BWG4 385 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SLC25A22Q9H936 323 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 IGHV5-51A0A0C4DH38 117 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ANKRD30BLA7E2S9 258 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 LINC00869P0C866 280 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PSG1P11464 419 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SGCBQ16585 318 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 DEFB133Q30KQ1 61 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MARCH3Q86UD3 253 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OR4X2Q8NGF9 303 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OR1L3Q8NH93 324 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 KCNE4Q8WWG9 221 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MS4A6AQ9H2W1 248 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SEPSECSQ9HD40 501 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MMP25Q9NPA2 562 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 G6PC2Q9NQR9 355 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 B4GALT7Q9UBV7 327 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 RARRES3Q9UL19 164 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 IDSB3KWA1 339 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 F8VVB4 439 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 F8VWA3 439 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 TNFSF13O75888 250 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 IL2RAP01589 272 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H1DP16402 221 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OPRM1P35372 400 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 UBE2V1Q13404 147 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM249Q2WGJ8 235 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 DMRTC1Q5HYR2 192 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 BATF2Q8N1L9 274 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OR4D5Q8NGN0 318 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OR52N5Q8NH56 324 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF721Q8TF20 911 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 C5orf30Q96GV9 206 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 LOXL4Q96JB6 756 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 C4orf45Q96LM5 186 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 STARD5Q9NSY2 213 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SLC22A13Q9Y226 551 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM272A0A1B0GTI8 110 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 A0A1W2PRS3 328 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 RAMP1O60894 148 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 IGKV1D-16P01601 117 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SELEP16581 610 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 FMODQ06828 376 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ASPHD2Q6ICH7 369 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF441Q8N8Z8 693 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 UBALD1Q8TB05 177 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MARS2Q96GW9 593 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 Q96M85 177 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 CLUHP3Q96NS8 147 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SPAG8Q99932 426 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 C20orf141Q9NUB4 165 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PSENENQ9NZ42 101 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 CCDC88CQ9P219 2028 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 SNAI2O43623 268 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 CDC14BO60729 498 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OR7C1O76099 320 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 CLPSP04118 112 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PPP1CCP36873 323 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 APOBEC1P41238 236 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 INSM1Q01101 510 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MFAP5Q13361 173 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PLCXD3Q63HM9 321 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 FAM169BQ8N8A8 192 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 NDFIP1Q9BT67 221 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 WDR54Q9H977 334 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ST20Q9HBF5 79 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 OCIAD1Q9NX40 245 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 DTX4Q9Y2E6 619 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 LOC107986453A0A1B0GWG9 222 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 TSPAN2O60636 221 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 MFAP4P55083 255 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 GFERP55789 205 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PPP1CAP62136 330 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ARL16Q0P5N6 197 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 RNPS1Q15287 305 aaKnown RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 LIAT1Q6ZQX7 453 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 TMEFF1Q8IYR6 380 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 PLPPR1Q8TBJ4 325 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF501Q96CX3 271 aaPredicted RBP5.28□□□□□ -1.56
PTPRD-214ENST00000540109 POLDIP2Q9Y2S7 368 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 BPTFQ12830 3046 aa5.28□□□□□ -1.56
PTPRD-214ENST00000540109 A8MWP6 167 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 G3V3Y1 287 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 NPIPB7O75200 414 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 ASAH2BP0C7U1 165 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 NSDHLQ15738 373 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 LINC00596Q86U02 117 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 OR4A16Q8NH70 328 aa5.27□□□□□ -1.57
PTPRD-214ENST00000540109 SLC25A33Q9BSK2 321 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms