RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 P2RX4Q99571 388 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 NICN1Q9BSH3 213 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 MRPL20Q9BYC9 149 aaKnown RBP17.45■□□□□ 0.38
SCARB1-206ENST00000539320 TPRKBQ9Y3C4 175 aa17.45■□□□□ 0.38
SCARB1-206ENST00000539320 TMEM14DPA8MWL7 114 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 K7EIL1 84 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 BPNT1O95861 308 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 MYF6P23409 242 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 HOXD3P31249 432 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-206ENST00000539320 FOXE3Q13461 319 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 LY6G6FQ5SQ64 297 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 SVOPQ8N4V2 548 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 NRG4Q8WWG1 115 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 FAAP24Q9BTP7 215 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 MCRIP2Q9BUT9 160 aaKnown RBP17.44■□□□□ 0.38
SCARB1-206ENST00000539320 ABRACLQ9P1F3 81 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 LRRC42Q9Y546 428 aa17.44■□□□□ 0.38
SCARB1-206ENST00000539320 RPLP1P05386 114 aaKnown RBP17.43■□□□□ 0.38
SCARB1-206ENST00000539320 ELANEP08246 267 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 CD37P11049 281 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 VDAC1P21796 283 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 KRTAP10-11P60412 298 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 QRFPP83859 136 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 EGFEM1PQ0D2K5 195 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 LCNL1Q6ZST4 164 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 MOB1BQ7L9L4 216 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 ODF3L1Q8IXM7 274 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 OR2AK2Q8NG84 335 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 TMEM203Q969S6 136 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 NABP2Q9BQ15 211 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 CHMP1AQ9HD42 196 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-206ENST00000539320 ZNF107Q9UII5 783 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-206ENST00000539320 ZNF580Q9UK33 172 aa17.43■□□□□ 0.38
SCARB1-206ENST00000539320 RGS10O43665 173 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 NAPSAO96009 420 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 HSMCR30P0CW71 290 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 SLC2A2P11168 524 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-206ENST00000539320 BLVRBP30043 206 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-206ENST00000539320 RPS25P62851 125 aaKnown RBP17.42■□□□□ 0.38
SCARB1-206ENST00000539320 CFHR3Q02985 330 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 ZNF833PQ6ZTB9 187 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 RNF152Q8N8N0 203 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 IFI27L2Q9H2X8 130 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 DUSP21Q9H596 190 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 STEAP1Q9UHE8 339 aa17.42■□□□□ 0.38
SCARB1-206ENST00000539320 SAA2-SAA4A0A096LPE2 208 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 A0A0A6YYD4 124 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 WI2-2373I1.2A0A1W2PRP0 233 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 SAA2P0DJI9 122 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-206ENST00000539320 OR5H8P0DN80 308 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 OR3A3P47888 321 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 ACTBP60709 375 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 TPBGQ13641 420 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 ZNF880Q6PDB4 577 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 IL1F10Q8WWZ1 152 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 RAX2Q96IS3 184 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 DUX3Q96PT4 197 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 ANKRD60Q9BZ19 345 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 PLGRKTQ9HBL7 147 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 PLEKHJ1Q9NW61 149 aa17.41■□□□□ 0.38
SCARB1-206ENST00000539320 CCL24O00175 119 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 SLC17A2O00624 439 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 IGHG4P01861 327 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 IGF1P05019 195 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 PSMA1P25786 263 aaKnown RBP17.4■□□□□ 0.38
SCARB1-206ENST00000539320 MLLT11Q13015 90 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-206ENST00000539320 P2RY14Q15391 338 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 TRAM1Q15629 374 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 FAM71F2Q6NXP2 309 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 TMEM91Q6ZNR0 172 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 OR8U1Q8NH10 309 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 SETD6Q8TBK2 473 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 KCTD7Q96MP8 289 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 GFI1Q99684 422 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 ZNF251Q9BRH9 671 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 URM1Q9BTM9 101 aaKnown RBP17.4■□□□□ 0.38
SCARB1-206ENST00000539320 LPAR5Q9H1C0 372 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 ISYNA1Q9NPH2 558 aa17.4■□□□□ 0.38
SCARB1-206ENST00000539320 ST8SIA5O15466 376 aa17.39■□□□□ 0.37
SCARB1-206ENST00000539320 ARL6IP5O75915 188 aa17.39■□□□□ 0.37
SCARB1-206ENST00000539320 RAB25P57735 213 aa17.39■□□□□ 0.37
SCARB1-206ENST00000539320 DEFB136Q30KP8 78 aa17.39■□□□□ 0.37
SCARB1-206ENST00000539320 CCDC90BQ9GZT6 254 aa17.39■□□□□ 0.37
SCARB1-206ENST00000539320 RIMS4Q9H426 269 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-206ENST00000539320 TRBV6-6A0A0A6YYG2 114 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 NBR2O15453 112 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 HLA-DRB1P01911 266 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 ARSBP15848 533 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 CNTFRP26992 372 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 CDX1P47902 265 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-206ENST00000539320 RAB11BQ15907 218 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 PIPOXQ9P0Z9 390 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 AK3Q9UIJ7 227 aa17.38■□□□□ 0.37
SCARB1-206ENST00000539320 AK6Q9Y3D8 172 aaKnown RBP17.38■□□□□ 0.37
SCARB1-206ENST00000539320 DNAH9Q9NYC9 4486 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 SOCS1O15524 211 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 CPEP16870 476 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 CRHBPP24387 322 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 PSMB8P28062 276 aa17.37■□□□□ 0.37
SCARB1-206ENST00000539320 HLA-DRB3P79483 266 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms