RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ZNF17P17021 662 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GGT1P19440 569 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 C4BPBP20851 252 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FASP25445 335 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DDTP30046 118 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 HTR1FP30939 366 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NTSP30990 170 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SRD5A2P31213 254 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FGF9P31371 208 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DDOSTP39656 456 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RPL13AP40429 203 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CRYBB2P43320 205 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CDX1P47902 265 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC6A8P48029 635 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DNASE1L1P49184 302 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CX3CR1P49238 355 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GSK3BP49841 420 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PPOXP50336 477 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 LHX2P50458 406 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NCBP2P52298 156 aaKnown RBP eCLIP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 BIDP55957 195 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CLDN18P56856 261 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TCTAP57738 103 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FBXW4P57775 412 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FXYD6P3P58550 94 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CDC42P60953 191 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NCALDP61601 193 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PKIAP61925 76 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RRAS2P62070 204 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GNG3P63215 75 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ARG2P78540 354 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPS10P82664 201 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 MRPS34P82930 218 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 H3F3AP84243 136 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF117Q03924 483 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TFF3Q07654 80 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CD47Q08722 323 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 KLRB1Q12918 225 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 UBE2V1Q13404 147 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 APOFQ13790 326 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 KIR2DS1Q14954 304 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PSG5Q15238 335 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RSU1Q15404 277 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SURF2Q15527 256 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1C1Q15619 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ODF4Q2M2E3 257 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DEFB109BQ30KR1 87 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PLPPR5Q32ZL2 321 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CDNFQ49AH0 187 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM74A3Q4VXF1 159 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR10J3Q5JRS4 329 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ELFN2Q5R3F8 820 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 C6orf141Q5SZD1 244 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DCST2Q5T1A1 773 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CPTPQ5TA50 214 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM78BQ5VT40 261 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RSBN1Q5VWQ0 802 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FBXW9Q5XUX1 488 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DMKNQ6E0U4 476 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RTL6Q6ICC9 239 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 FAM166AQ6J272 317 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 LCN8Q6JVE9 175 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CD200R1LQ6Q8B3 271 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CD164L2Q6UWJ8 174 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PLXDC2Q6UX71 529 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 Q71RC1 249 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2W3Q7Z3T1 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 C6orf120Q7Z4R8 191 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NOXA1Q86UR1 476 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RPS19BP1Q86WX3 136 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CMTM1Q8IZ96 169 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RNF113BQ8IZP6 322 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CADM2Q8N3J6 435 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 STPG2Q8N412 459 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ZNF843Q8N446 348 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 ARRDC1Q8N5I2 433 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 C12orf45Q8N5I9 185 aaPredicted RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PARP16Q8N5Y8 322 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 NPEPL1Q8NDH3 523 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 KBTBD8Q8NFY9 601 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC26A10Q8NG04 563 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR2M3Q8NG83 312 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5D16Q8NGK9 328 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR6M1Q8NGM8 313 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR6T1Q8NGN1 323 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR8U1Q8NH10 309 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5J2Q8NH18 312 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR4C3Q8NH37 302 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR5B3Q8NH48 314 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR13C6PQ8NH95 151 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 OR1F12Q8NHA8 337 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TERB2Q8NHR7 220 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 CNIH3Q8TBE1 160 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SLC7A13Q8TCU3 470 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 GNPDA2Q8TDQ7 276 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 DOK4Q8TEW6 326 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 SFT2D1Q8WV19 159 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 PCNPQ8WW12 178 aaKnown RBP1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 TCTEX1D2Q8WW35 142 aa1.5□□□□□ -2.17
CBX3P4-201ENST00000538909 RORBQ92753 470 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms