RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PP6455Q8WZ26 134 aa7.44□□□□□ -1.22
GGA3-202ENST00000538886 NINJ1Q92982 152 aa7.44□□□□□ -1.22
GGA3-202ENST00000538886 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
GGA3-202ENST00000538886 ST6GALNAC5Q9BVH7 336 aa7.44□□□□□ -1.22
GGA3-202ENST00000538886 TMEM59Q9BXS4 323 aa7.44□□□□□ -1.22
GGA3-202ENST00000538886 EXOGQ9Y2C4 368 aaKnown RBP7.44□□□□□ -1.22
GGA3-202ENST00000538886 K7EPK0 472 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 SCGB1D1O95968 90 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 TUBG1P23258 451 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 HTR2CP28335 458 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 MMP15P51511 669 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 MEF2DQ14814 521 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 FAM71E2Q8N5Q1 922 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 ZNRF1Q8ND25 227 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 SMIM4Q8WVI0 70 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 BARX1Q9HBU1 254 aaPredicted RBP7.43□□□□□ -1.22
GGA3-202ENST00000538886 GNG12Q9UBI6 72 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 NPTNQ9Y639 398 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 LRBAP50851 2863 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 UBR5O95071 2799 aaPredicted RBP7.43□□□□□ -1.22
GGA3-202ENST00000538886 A0A1W2PPR1 153 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 DLEU1O43261 78 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 ATF1P18846 271 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 OMGP23515 440 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 GUSBP1Q15486 140 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 NCR3LG1Q68D85 454 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 MRPL41Q8IXM3 137 aaKnown RBP7.43□□□□□ -1.22
GGA3-202ENST00000538886 WFDC11Q8NEX6 87 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 C1QTNF5Q9BXJ0 243 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 RNF24Q9Y225 148 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 TRAV18A0A075B6X5 111 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 C9orf170A2RU37 121 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 OR2F2O95006 317 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 S100A10P60903 97 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 OR2F1Q13607 317 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 DEFB113Q30KQ7 82 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
GGA3-202ENST00000538886 ACOT7LQ6ZUV0 252 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 OR8B3Q8NGG8 313 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 PPP1R1CQ8WVI7 109 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 DERL3Q96Q80 235 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 OR8B2Q96RD0 313 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 PRDM13Q9H4Q3 707 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 KPTNQ9Y664 436 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 ATRQ13535 2644 aa7.43□□□□□ -1.22
GGA3-202ENST00000538886 TRAV8-7A0A075B6U6 113 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 A0A1W2PP11 408 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 SNRPGP15A8MWD9 76 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 UMAD1C9J7I0 102 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 E9PQ18 207 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 SH2D1BO14796 132 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 PGAM2P15259 253 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 CD200P41217 278 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 ROM1Q03395 351 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 TFF3Q07654 80 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 UBE2V2Q15819 145 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 KCNMB1Q16558 191 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 FAM58AQ8N1B3 248 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 THRSPQ92748 146 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 FAM234AQ9H0X4 552 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 MMP26Q9NRE1 261 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 JKAMPQ9P055 326 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 CYB5BO43169 146 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 BCL3P20749 454 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 IL2RGP31785 369 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 SULT1A1P50225 295 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 EIF5AP63241 154 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 KLF9Q13886 244 aaPredicted RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 KHDC3LQ587J8 217 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 LHFPL2Q6ZUX7 228 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 SMIM15Q7Z3B0 74 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 OR4K15Q8NH41 348 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 NEU4Q8WWR8 484 aaPredicted RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 G6PC2Q9NQR9 355 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 KCNIP1Q9NZI2 227 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 GSKIPQ9P0R6 139 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 CARHSP1Q9Y2V2 147 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 KMT2BQ9UMN6 2715 aaPredicted RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 ARHGAP32A7KAX9 2087 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 HLA-AP01891 365 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 RCC1P18754 421 aaPredicted RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 C16orf54Q6UWD8 224 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 IL17RELQ6ZVW7 336 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 ZNF295-AS1Q8N0V1 137 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 FAM216BQ8N7L0 139 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 RAB24Q969Q5 203 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 DUX5Q96PT3 197 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 MYOZ1Q9NP98 299 aaPredicted RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 RCC2Q9P258 522 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 SF3B6Q9Y3B4 125 aaKnown RBP7.42□□□□□ -1.22
GGA3-202ENST00000538886 FBXO7Q9Y3I1 522 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms